RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ASB7Q9H672 318 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 TMBIM4Q9HC24 238 aa2.46□□□□□ -2.02
SMC4-218ENST00000486711 ADGRL1O94910 1474 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 BRWD3Q6RI45 1802 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 GOLGA8IPA6NC78 632 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 GMNCA6NCL1 334 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 CD300LBA8K4G0 201 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 YKT6O15498 198 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 KCNK2O95069 426 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 PFN1P07737 140 aaKnown RBP2.45□□□□□ -2.02
SMC4-218ENST00000486711 TTPAP49638 278 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 HADHBP55084 474 aaKnown RBP2.45□□□□□ -2.02
SMC4-218ENST00000486711 UBE2KP61086 200 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 PRKCDQ05655 676 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 PSG3Q16557 428 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 CEACAM16Q2WEN9 425 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 LINC00303Q3SY05 128 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 ACTBL2Q562R1 376 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 CLLU1OSQ5K130 101 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 ZNF773Q6PK81 442 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 LINC00596Q86U02 117 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 TCAIMQ8N3R3 496 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 LINC00337Q8N6G1 96 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 ZNF555Q8NEP9 628 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 ZNF396Q96N95 335 aaPredicted RBP2.45□□□□□ -2.02
SMC4-218ENST00000486711 APOL4Q9BPW4 351 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 PLEKHA1Q9HB21 404 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 SLC22A14Q9Y267 594 aa2.45□□□□□ -2.02
SMC4-218ENST00000486711 RBFOX3A6NFN3 312 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 UBDO15205 165 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 SCGB1C2P0DMR2 95 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 RNASE2P10153 161 aaKnown RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 MLNP12872 115 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 PRTN3P24158 256 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 TEAD1P28347 426 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 IMPA1P29218 277 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 LCN1P31025 176 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 RPA3P35244 121 aaPredicted RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 IL15RAQ13261 267 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 USF2Q15853 346 aaPredicted RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 TMEM69Q5SWH9 247 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 FAM19A1Q7Z5A9 133 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 OR4K17Q8NGC6 315 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 OR6K3Q8NGY3 331 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 SCGB1C1Q8TD33 95 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 ITLN2Q8WWU7 325 aaPredicted RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 RBPMSQ93062 196 aaKnown RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 ZMYND19Q96E35 227 aaPredicted RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 CATSPER2Q96P56 530 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 ANAPC13Q9BS18 74 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 RTBDNQ9BSG5 229 aaPredicted RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 FAM60AQ9NP50 221 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 NXT1Q9UKK6 140 aaKnown RBP2.44□□□□□ -2.02
SMC4-218ENST00000486711 SIGLEC1Q9BZZ2 1709 aa2.44□□□□□ -2.02
SMC4-218ENST00000486711 NRCAMQ92823 1304 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 K7ERQ8 282 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 CST4P01036 141 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 PSMB9P28065 219 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 KCNJ3P48549 501 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 STX3Q13277 289 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 TRAM1Q15629 374 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 TRIP13Q15645 432 aaPredicted RBP2.43□□□□□ -2.02
SMC4-218ENST00000486711 TMEM136Q6ZRR5 245 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 GALNT10Q86SR1 603 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 SPICQ8N5J4 248 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 CPB2Q96IY4 423 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 ZNF75AQ96N20 296 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 PITX2Q99697 317 aa2.43□□□□□ -2.02
SMC4-218ENST00000486711 C2orf16Q68DN1 1984 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 RPRD2Q5VT52 1461 aaKnown RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 PLPP3O14495 311 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 LDOC1O95751 146 aaPredicted RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 CECR9P0C854 216 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 ELK4P28324 431 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 GCLMP48507 274 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 FAM53BQ14153 422 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 IGFBP7Q16270 282 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 Q499Y3 187 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 LRRC6Q86X45 466 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 CDRT4Q8N9R6 151 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 TWIST2Q8WVJ9 160 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 TNFRSF14Q92956 283 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 FMC1Q96HJ9 113 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 SLC25A31Q9H0C2 315 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 METTL8Q9H825 291 aaKnown RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 TMEM38BQ9NVV0 291 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 C14orf166Q9Y224 244 aaKnown RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 ZNF706Q9Y5V0 76 aaPredicted RBP2.42□□□□□ -2.02
SMC4-218ENST00000486711 USH1CQ9Y6N9 552 aa2.42□□□□□ -2.02
SMC4-218ENST00000486711 BAZ2AQ9UIF9 1905 aaKnown RBP2.41□□□□□ -2.02
SMC4-218ENST00000486711 GOLGA8QA0A0J9YX86 632 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 IGLL5B9A064 214 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 K7EPK0 472 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 K7ERS5 55 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 GYG2O15488 501 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 FADS2O95864 444 aaKnown RBP2.41□□□□□ -2.02
SMC4-218ENST00000486711 PTHLHP12272 177 aa2.41□□□□□ -2.02
SMC4-218ENST00000486711 GTF2H1P32780 548 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms