RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 GABRR1P24046 479 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 SSBP1Q04837 148 aaKnown RBP11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZNF146Q15072 292 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 MOGAT2Q3SYC2 334 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZNF260Q3ZCT1 412 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 C11orf71Q6IPW1 123 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 ACP7Q6ZNF0 438 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 C20orf204Q6ZNR8 217 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZNF488Q96MN9 340 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 THAP7Q9BT49 309 aaPredicted RBP11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 IFT22Q9H7X7 185 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 UBTD1Q9HAC8 227 aa11.19□□□□□ -0.62
VTI1BP1-201ENST00000486325 ARFGEF3Q5TH69 2177 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 A0A0A6YYD4 124 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 FOXI3A8MTJ6 420 aaPredicted RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 PDCD6O75340 191 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 RBBP9O75884 186 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 OR7C1O76099 320 aaPredicted RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 SOD3P08294 240 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 GSTT2BP0CG30 244 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 HIST1H1DP16402 221 aaKnown RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 INPP1P49441 399 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 SCN1BQ07699 218 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 RBM39Q14498 530 aaKnown RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 PIGYQ3MUY2 71 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 TRIQKQ629K1 86 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZCCHC24Q8N2G6 241 aaKnown RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 C19orf18Q8NEA5 215 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 SMIM4Q8WVI0 70 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 ARHGAP5-AS1Q96IT6 56 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 PECRQ9BY49 303 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 CLEC4MQ9H2X3 399 aaPredicted RBP11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 DNAJB11Q9UBS4 358 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 LAMP3Q9UQV4 416 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 RELNP78509 3460 aa11.18□□□□□ -0.62
VTI1BP1-201ENST00000486325 IGHV1-69-2A0A0G2JMI3 117 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 A0A1W2PPR1 153 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 A1L4Q6 167 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 ISPDA4D126 451 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MCRIP1C9JLW8 97 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 H7C417 338 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MUC1P15941 1255 aaPredicted RBP11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 GNB3P16520 340 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 CHATP28329 748 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 CBX5P45973 191 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 GNG2P59768 71 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MRPS11P82912 194 aaKnown RBP11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MRPS15P82914 257 aaKnown RBP11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 IKZF1Q13422 519 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MADCAM1Q13477 382 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 MICBQ29980 383 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 HFEQ30201 348 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 PLAC9Q5JTB6 97 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 ATAD3CQ5T2N8 411 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 DNM1P46Q6ZS02 220 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 GCSAMQ8N6F7 178 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 DLL4Q9NR61 685 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 ABCB10Q9NRK6 738 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 TAS2R8Q9NYW2 309 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 LRRK2Q5S007 2527 aa11.17□□□□□ -0.62
VTI1BP1-201ENST00000486325 POM121CA8CG34 1229 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 MFNGO00587 321 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 LPLP06858 475 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 CD3GP09693 182 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 CSF3P09919 207 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 IL7P13232 177 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZNF44P15621 663 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 LMO1P25800 156 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 SNU13P55769 128 aaKnown RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 DEFA1P59665 94 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 DEFA3P59666 94 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 AP3S2P59780 193 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ACTBP60709 375 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ACTG1P63261 375 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ARFRP1Q13795 201 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 BAK1Q16611 211 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 NKAPLQ5M9Q1 402 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 SIGIRRQ6IA17 410 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 BATF2Q8N1L9 274 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 OR52I2Q8NH67 350 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 PPP1R35Q8TAP8 253 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 GPX8Q8TED1 209 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 DEDD2Q8WXF8 326 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ST8SIA4Q92187 359 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 RDH5Q92781 318 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 SEH1LQ96EE3 360 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 C14orf79Q96F83 325 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 CACNG6Q9BXT2 260 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 WDR13Q9H1Z4 485 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 RIMS4Q9H426 269 aaPredicted RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 PLEKHF2Q9H8W4 249 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 ZMAT3Q9HA38 289 aaKnown RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 TMEM106BQ9NUM4 274 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 NLKQ9UBE8 527 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 MTFP1Q9UDX5 166 aa11.16□□□□□ -0.62
VTI1BP1-201ENST00000486325 WIPI2Q9Y4P8 454 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms