RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NAPSAO96009 420 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 PLATP00750 562 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 IFNA7P01567 189 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 SLC25A4P12235 298 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 RPS2P15880 293 aaKnown RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 IDH3GP51553 393 aaPredicted RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 SNRPD2P62316 118 aaKnown RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 ZNF345Q14585 488 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 PLEKHN1Q494U1 663 aaPredicted RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 DCAF12L2Q5VW00 463 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 VWA1Q6PCB0 445 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 C17orf107Q6ZR85 190 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 CNEP1R1Q8N9A8 125 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 COQ8AQ8NI60 647 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 TMEM230Q96A57 120 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 STARD4Q96DR4 205 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 MICU1Q9BPX6 476 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 RTBDNQ9BSG5 229 aaPredicted RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 BCL2L14Q9BZR8 327 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 OR51I2Q9H344 312 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 SLC23A1Q9UHI7 598 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 C14orf166Q9Y224 244 aaKnown RBP10.24□□□□□ -0.77
PKP4-213ENST00000486254 POLDIP2Q9Y2S7 368 aa10.24□□□□□ -0.77
PKP4-213ENST00000486254 OR7C1O76099 320 aaPredicted RBP10.23□□□□□ -0.77
PKP4-213ENST00000486254 OR5H8P0DN80 308 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 BCL3P20749 454 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 UCP2P55851 309 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 C1orf185Q5T7R7 199 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 SHEQ5VZ18 495 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 ZNF324BQ6AW86 544 aaPredicted RBP10.23□□□□□ -0.77
PKP4-213ENST00000486254 SEM1Q6ZVN7 128 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 ADAD2Q8NCV1 583 aaKnown RBP10.23□□□□□ -0.77
PKP4-213ENST00000486254 OR5M9Q8NGP3 310 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 PIK3IP1Q96FE7 263 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 ELMOD3Q96FG2 381 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 VRK1Q99986 396 aaPredicted RBP10.23□□□□□ -0.77
PKP4-213ENST00000486254 SFXN3Q9BWM7 321 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 NMES1Q9C002 83 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 TREM2Q9NZC2 230 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 MTCH1Q9NZJ7 389 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 CRIM1Q9NZV1 1036 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 ZNF230Q9UIE0 474 aaPredicted RBP10.23□□□□□ -0.77
PKP4-213ENST00000486254 DMXL1Q9Y485 3027 aa10.23□□□□□ -0.77
PKP4-213ENST00000486254 IGKV1D-8A0A087WSZ0 117 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 KIR2DS1A0A191URI9 304 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 OR5H14A6NHG9 310 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 OR5H1A6NKK0 313 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 TOXO94900 526 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 CTXN2P0C2S0 81 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 KITLGP21583 273 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 VAMP1P23763 118 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 S100A11P31949 105 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 KIR2DS4P43632 304 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 NPBWR2P48146 333 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 NPY4RP50391 375 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 KIR2DS1Q14954 304 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 ZNF680Q8NEM1 530 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 APC2O95996 2303 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 TRBV6-7A0A0A0MS04 114 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 A0A0D9SG52 128 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 L7N2F9 121 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 NOS1APO75052 506 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 WISP2O76076 250 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 OR2F2O95006 317 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 SIX6O95475 246 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 DIRAS3O95661 229 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 PDGFAP04085 211 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 CELA3BP08861 270 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 AKR1C4P17516 323 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 CXCL2P19875 107 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 CEACAM8P31997 349 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 MDH2P40926 338 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 GLP1RP43220 463 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 ERVK11-1P61568 191 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 SUPT4H1P63272 117 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 FOXF2Q12947 444 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 OR2F1Q13607 317 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 RBM39Q14498 530 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 OPCMLQ14982 345 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 MBNL2Q5VZF2 373 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 OR2T2Q6IF00 324 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 ZNF585AQ6P3V2 769 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 HAGHLQ6PII5 290 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 FAM180AQ6UWF9 173 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 CLEC18BQ6UXF7 455 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 BHLHA15Q7RTS1 189 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 SSX8Q7RTT4 187 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 MYPOPQ86VE0 399 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 SPERTQ8NA61 448 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 FAM57AQ8TBR7 257 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 EXTL1Q92935 676 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 SLAMF9Q96A28 289 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 MARS2Q96GW9 593 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 ZNF2Q9BSG1 426 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 HDHD3Q9BSH5 251 aaPredicted RBP10.22□□□□□ -0.77
PKP4-213ENST00000486254 ZNF442Q9H7R0 627 aa10.22□□□□□ -0.77
PKP4-213ENST00000486254 COMMD9Q9P000 198 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms