RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 OR10D4PQ8NGN7 298 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 C19orf12Q9NSK7 152 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 RTTNQ86VV8 2226 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 MASP2O00187 686 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 DXOO77932 396 aaKnown RBP9.72□□□□□ -0.85
HDAC6-228ENST00000486227 CLDN1O95832 211 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 HPNP05981 417 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 FGF5P12034 268 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 SLC25A4P12235 298 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 CD96P40200 585 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 MIDNQ504T8 468 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 C9orf152Q5JTZ5 239 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ATPAF1Q5TC12 328 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ABHD3Q8WU67 409 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 SLC39A7Q92504 469 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 GNPNAT1Q96EK6 184 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF385AQ96PM9 386 aaKnown RBP9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ADAM19Q9H013 955 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ST6GALNAC2Q9UJ37 374 aa9.72□□□□□ -0.85
HDAC6-228ENST00000486227 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-228ENST00000486227 CRHP06850 196 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 IFI6P09912 130 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 RAB11AP62491 216 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 IGLV3-21P80748 117 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-228ENST00000486227 LPAR3Q9UBY5 353 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 S100A7P31151 101 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 TUSC5Q8IXB3 177 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 FAM185AQ8N0U4 392 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 PLEKHF2Q9H8W4 249 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 ZNF230Q9UIE0 474 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-228ENST00000486227 HS3ST3B1Q9Y662 390 aa9.71□□□□□ -0.85
HDAC6-228ENST00000486227 A0A0J9YW62 118 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 A8MXK9 166 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 PPP5D1E7EU14 171 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 LYZL6O75951 148 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 VSIG10L2P0DP72 767 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 LSM6P62312 80 aaKnown RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 HAGHQ16775 308 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 PNLIPRP3Q17RR3 467 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 TMEM41BQ5BJD5 291 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF705AQ6ZN79 300 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 GLRX5Q86SX6 157 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 CATSPERDQ86XM0 798 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 UBAC2Q8NBM4 344 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 SF3B5Q9BWJ5 86 aaKnown RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 SAMD10Q9BYL1 202 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF646O15015 1829 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 TGFBR3LH3BV60 316 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 PHOX2AO14813 284 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 SP1P08047 785 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF883P0CG24 379 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 HIST1H1DP16402 221 aaKnown RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 FUT3P21217 361 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 GUCA2BQ16661 112 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 ASB5Q8WWX0 329 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 PPP1R14DQ9NXH3 145 aa9.71□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF107Q9UII5 783 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-228ENST00000486227 NKX2-8O15522 239 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 OR2A4O95047 310 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 APOA2P02652 100 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 CD1AP06126 327 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 FGF7P21781 194 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 B2MP61769 119 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 BRICD5Q6PL45 260 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 RNF133Q8WVZ7 376 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 RTN4IP1Q8WWV3 396 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-228ENST00000486227 OR2A7Q96R45 310 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ANKRD36A6QL64 1941 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SPRY3O43610 288 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 THY1P04216 161 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 IGKV3-11P04433 115 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 CD3EP07766 207 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 NKX2-1P43699 371 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ADIRFQ15847 76 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ZNF658BQ4V348 819 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-228ENST00000486227 DCAF12L2Q5VW00 463 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 EXTL1Q92935 676 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SLC35B3Q9H1N7 401 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 PPP1R3CQ9UQK1 317 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SEMA7AO75326 666 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ADRA2CP18825 462 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 FPR2P25090 351 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 ID4P47928 161 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 NUBP1P53384 320 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 PIGPP57054 158 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 AWAT1Q58HT5 328 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 C6orf201Q7Z4U5 140 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 TVP23CQ96ET8 276 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SPSB2Q99619 263 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 PRR33A8MZF0 331 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SFT2D2O95562 160 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SPINK2P20155 84 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 CA6P23280 308 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 GNG3P63215 75 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 SMIM21Q3B7S5 101 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 GVQW1Q8N7I0 195 aa9.7□□□□□ -0.86
HDAC6-228ENST00000486227 AP1S3Q96PC3 154 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms