RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 PLA2G5P39877 138 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 SSR4P51571 173 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ZNF121P58317 390 aaPredicted RBP3.8□□□□□ -1.8
RTN4-213ENST00000485749 RPS18P62269 152 aaKnown RBP3.8□□□□□ -1.8
RTN4-213ENST00000485749 FMODQ06828 376 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ECH1Q13011 328 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OR5I1Q13606 314 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 GGTLC2Q14390 218 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OXA1LQ15070 435 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 FCN2Q15485 313 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 C4orf26Q17RF5 130 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OCIAD2Q56VL3 154 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 DCAF12Q5T6F0 453 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 TEX36Q5VZQ5 186 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 PLPP4Q5VZY2 271 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 GLYATQ6IB77 296 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 AGTRAPQ6RW13 159 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 C5orf24Q7Z6I8 188 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 SLC47A2Q86VL8 602 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 BAP18Q8IXM2 172 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ZNF567Q8N184 647 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 KLHDC1Q8N7A1 406 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 C15orf54Q8N8G6 183 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ZNF485Q8NCK3 441 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OR4F17Q8NGA8 305 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OR4F5Q8NH21 305 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OR4X1Q8NH49 305 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 CYGBQ8WWM9 190 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RND1Q92730 232 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 DLX4Q92988 240 aaPredicted RBP3.8□□□□□ -1.8
RTN4-213ENST00000485749 EEF1AKMT3Q96AZ1 226 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 PIK3IP1Q96FE7 263 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RCHY1Q96PM5 261 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 OR4F4Q96R69 305 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 GPR21Q99679 349 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 GABRG3Q99928 467 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RASL11BQ9BPW5 248 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ZNF649Q9BS31 505 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 FAAP24Q9BTP7 215 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 Q9H521 79 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 PLSCR3Q9NRY6 295 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 GALPQ9UBC7 116 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 DHCR7Q9UBM7 475 aaKnown RBP3.8□□□□□ -1.8
RTN4-213ENST00000485749 SCP2D1Q9UJQ7 156 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 POU2F3Q9UKI9 436 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 SLC7A7Q9UM01 511 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 ZFP30Q9Y2G7 519 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.8□□□□□ -1.8
RTN4-213ENST00000485749 EXOSC1Q9Y3B2 195 aaKnown RBP3.8□□□□□ -1.8
RTN4-213ENST00000485749 WSB1Q9Y6I7 421 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 PRSS21Q9Y6M0 314 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 TIAM2Q8IVF5 1701 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 KIF1AQ12756 1690 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 CAMTA1Q9Y6Y1 1673 aa3.8□□□□□ -1.8
RTN4-213ENST00000485749 RIC1Q4ADV7 1423 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CNTNAP1P78357 1384 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 IGHV2-70DA0A0C4DH43 119 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 A0A1B0GTH9 108 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 MEIOCA2RUB1 952 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 TMEM189A5PLL7 270 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 LINC00862A6NCI5 91 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR4C46A6NHA9 309 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 IDSB3KWA1 339 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 KRBOX1C9JBD0 128 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 I3L521 148 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CCL21O00585 134 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CXCL13O43927 109 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 SNAP91O60641 907 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 WDR1O75083 606 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 DUSP11O75319 330 aaKnown RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 TOXO94900 526 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CRYGDP07320 174 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CTSLP07711 333 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR5AL1P0C617 328 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ZNF30P17039 623 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 RAB5AP20339 215 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 PSMB1P20618 241 aaKnown RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 USF1P22415 310 aaPredicted RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 CERS1P27544 350 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CASP1P29466 404 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CDKN2BP42772 138 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR1E2P47887 323 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 EVX1P49640 407 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 PGFP49763 221 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 RAB38P57729 211 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR12D2P58182 307 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 RAB5BP61020 215 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 COPZ1P61923 177 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 SP4Q02446 784 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 POU3F1Q03052 451 aaPredicted RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 LTBQ06643 244 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 SMAGPQ0VAQ4 97 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 SLC10A2Q12908 348 aaPredicted RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 EIF2B1Q14232 305 aaKnown RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 MICAQ29983 383 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 TMEM69Q5SWH9 247 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OTUD1Q5VV17 481 aaPredicted RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 TMEM215Q68D42 235 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 AWAT2Q6E213 333 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms