RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CCR5P51681 352 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 EFNA3P52797 238 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SLURP1P55000 103 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 BIDP55957 195 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST1H2BDP58876 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 OR2B8PP59922 312 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 RAB4BP61018 213 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST1H2BCP62807 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 GABREP78334 506 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 EWSR1Q01844 656 aaKnown RBP eCLIP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 BAXQ07812 192 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SMAD4Q13485 552 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 FZD2Q14332 565 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 ELOBQ15370 118 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 OR8B8Q15620 311 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 KISS1Q15726 138 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST3H3Q16695 136 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST2H2BEQ16778 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 ACSF3Q4G176 576 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 AKIRIN2Q53H80 203 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 PLXDC2Q6UX71 529 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 C17orf82Q86X59 251 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 FOXRED2Q8IWF2 684 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 LGI3Q8N145 548 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 CARFQ8N187 725 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 METTL27Q8N6F8 245 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF383Q8NA42 475 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SLC38A9Q8NBW4 561 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 APCDD1LQ8NCL9 501 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 OR51T1Q8NGJ9 327 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 OR6X1Q8NH79 312 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 RNASE11Q8TAA1 199 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 CD300LFQ8TDQ1 290 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HAS2Q92819 552 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST1H2BHQ93079 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 MR1Q95460 341 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SLAMF9Q96A28 289 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 MOB3AQ96BX8 217 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 DDIT4LQ96D03 193 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 RAB39BQ96DA2 213 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 MSI2Q96DH6 328 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 RBMXL1Q96E39 390 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 C14orf144Q96I85 54 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 MRGPRX1Q96LB2 322 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST1H2BNQ99877 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HIST1H2BMQ99879 126 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SPATA25Q9BR10 227 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 PIGQQ9BRB3 760 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 C2orf88Q9BSF0 95 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 ZNF2Q9BSG1 426 aaPredicted RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 C20orf24Q9BUV8 137 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 ST6GALNAC5Q9BVH7 336 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 EIF5A2Q9GZV4 153 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SH3BGRL3Q9H299 93 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 SERINC1Q9NRX5 453 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 TMEM242Q9NWH2 141 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 DOK5Q9P104 306 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 COPS7AQ9UBW8 275 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 MCTS1Q9ULC4 181 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 PADI1Q9ULC6 663 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 RCL1Q9Y2P8 373 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 FBXO7Q9Y3I1 522 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 LSM5Q9Y4Y9 91 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 B3GALT1Q9Y5Z6 326 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 PRRC2BQ5JSZ5 2229 aaKnown RBP4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 HEATR5AQ86XA9 2040 aa4.07□□□□□ -1.76
SMARCC1-206ENST00000485737 CENPFP49454 3210 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 LOC102723971A0A1B0GUV8 181 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 DUXBA0A1W2PPF3 345 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 FAM230AA0A1W2PPH8 454 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 CLEC18AA5D8T8 446 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 OR5H15A6NDH6 313 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 ARGFXA6NJG6 315 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 OR5H1A6NKK0 313 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 TSTD3H0UI37 97 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 SLC31A2O15432 143 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 XRCC2O43543 280 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 RAMP1O60894 148 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 DHRS3O75911 302 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 C1QL1O75973 258 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 SCAF4O95104 1147 aaKnown RBP4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 SEMA4FO95754 770 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 HBE1P02100 147 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 IGHV4-34P06331 123 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 CXCL1P09341 107 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 OR5AC1P0C628 307 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 OR5H8P0DN80 308 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 SELLP14151 372 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 FOLR1P15328 257 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 ATP6V0CP27449 155 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 DDTP30046 118 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 OTX1P32242 354 aaPredicted RBP4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 LTBRP36941 435 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 RPS10P46783 165 aaKnown RBP4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 CSNK1A1P48729 337 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 FHITP49789 147 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 BLKP51451 505 aa4.06□□□□□ -1.76
SMARCC1-206ENST00000485737 GFRA1P56159 465 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms