RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TAMM41Q96BW9 452 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 REEP6Q96HR9 211 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF714Q96N38 554 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 OR4C12Q96R67 309 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 COPS4Q9BT78 406 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 GON7Q9BXV9 100 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 FGF23Q9GZV9 251 aaPredicted RBP4.07□□□□□ -1.76
PTPN4-210ENST00000485247 TMEM133Q9H2Q1 129 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 GNB4Q9HAV0 340 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 ACTR3BQ9P1U1 418 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 OR14J1Q9UGF5 321 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 CYB5R1Q9UHQ9 305 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 B9D1Q9UPM9 204 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
PTPN4-210ENST00000485247 CEPT1Q9Y6K0 416 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 SESN1Q9Y6P5 492 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 TNCP24821 2201 aa4.07□□□□□ -1.76
PTPN4-210ENST00000485247 hCG_38984A0A1B0GV85 526 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 OR6C68A6NDL8 312 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ARRDC5A6NEK1 342 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 EVPLLA8MZ36 301 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 PSMD9O00233 223 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CDC42EP2O14613 210 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 MMP23AO75900 390 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 SERPINA1P01009 418 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ANXA2P07355 339 aaKnown RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TROVE2P10155 538 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TMEM11P17152 192 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CRABP1P29762 137 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CASQ1P31415 396 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 OTX1P32242 354 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 MNDAP41218 407 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 GPR4P46093 362 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 SLC1A6P48664 564 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 GPM6AP51674 278 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ISL1P61371 349 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 BDH1Q02338 343 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CKAP4Q07065 602 aaKnown RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TAF13Q15543 124 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CYP51A1Q16850 503 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 SMIM21Q3B7S5 101 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ANKDD1AQ495B1 522 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ZBED5Q49AG3 693 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 KLHL12Q53G59 568 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 FAM209BQ5JX69 171 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TPTE2P1Q5T6R2 138 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 LINC00336Q6ZUF6 198 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TCF23Q7RTU1 214 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ABHD12Q8N2K0 398 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ASCC1Q8N9N2 400 aaKnown RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CSNK2A3Q8NEV1 391 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF671Q8TAW3 534 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF596Q8TC21 504 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 HPSE2Q8WWQ2 592 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 PIGCQ92535 297 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF488Q96MN9 340 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 OR8B4Q96RC9 309 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ARPC5LQ9BPX5 153 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 PARD6BQ9BYG5 372 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 TXLNGYQ9BZA5 131 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 ALX4Q9H161 411 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 SDR39U1Q9NRG7 319 aaPredicted RBP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 CENPMQ9NSP4 180 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.06□□□□□ -1.76
PTPN4-210ENST00000485247 MPC1Q9Y5U8 109 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 IER3IP1Q9Y5U9 82 aa4.06□□□□□ -1.76
PTPN4-210ENST00000485247 HERC1Q15751 4861 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 UBR4Q5T4S7 5183 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 HTR3EA5X5Y0 456 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF732B4DXR9 585 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 BUB1B-PAK6H3BSN5 160 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 I3L521 148 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 K7N7A8 449 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 FGF16O43320 207 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 IGHG4P01861 327 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 OR8U9P0C7N5 309 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 PSMB8P28062 276 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 CEACAM3P40198 252 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 GPR12P47775 334 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 CRYBA2P53672 197 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ESRRGP62508 458 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 PRKCDQ05655 676 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ST3GAL3Q11203 375 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 KLF9Q13886 244 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 KIAA0141Q14154 515 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 EIF2B1Q14232 305 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 RBM39Q14498 530 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 EDDM3AQ14507 147 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 SLC36A3Q495N2 470 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 CEP78Q5JTW2 689 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 PAGE3Q5JUK9 113 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 CCDC144NLQ6NUI1 221 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 HAGHLQ6PII5 290 aaPredicted RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 TBPL2Q6SJ96 375 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 SMARCD3Q6STE5 483 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 GDPD3Q7L5L3 318 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 PATL1Q86TB9 770 aaKnown RBP4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ADCK1Q86TW2 530 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ANKRD13BQ86YJ7 626 aa4.05□□□□□ -1.76
PTPN4-210ENST00000485247 ZDHHC21Q8IVQ6 265 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms