RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 ZMAT3Q9HA38 289 aaKnown RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 ABCB10Q9NRK6 738 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 RASL12Q9NYN1 266 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 RNF7Q9UBF6 113 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 TANC2Q9HCD6 1990 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 DYSFO75923 2080 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 TMEM235A6NFC5 223 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 C3orf80F5H4A9 247 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 WNT9BO14905 357 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GSTZ1O43708 216 aaPredicted RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GSTP1P09211 210 aaKnown RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 CSF3P09919 207 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 DGCR2P98153 550 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 BAK1Q16611 211 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 ZNF181Q2M3W8 571 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 NKAPLQ5M9Q1 402 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 ACP7Q6ZNF0 438 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GCSAMQ8N6F7 178 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 NEDD4LQ96PU5 975 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 WDR13Q9H1Z4 485 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 CLEC4MQ9H2X3 399 aaPredicted RBP17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 HSF4Q9ULV5 492 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 LAMP3Q9UQV4 416 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 NPTNQ9Y639 398 aa17.24■□□□□ 0.35
VCPKMT-203ENST00000484763 GABARAPH6UMI1 98 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 MFNGO00587 321 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 IL7P13232 177 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 IRF2P14316 349 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 CHATP28329 748 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 PRSS3P35030 304 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 IKZF1Q13422 519 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 TRIQKQ629K1 86 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 PECRQ9BY49 303 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 PLEKHJ1Q9NW61 149 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 ZNF581Q9P0T4 197 aa17.23■□□□□ 0.35
VCPKMT-203ENST00000484763 TENM4Q6N022 2769 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 LRRC30A6NM36 301 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 H3BUI4 141 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 PDCD6O75340 191 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 LHBP01229 141 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 EGR1P18146 543 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 ZNF146Q15072 292 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 PDCD1Q15116 288 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 RNASE12Q5GAN4 147 aaKnown RBP17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 RTN4RL2Q86UN3 420 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 FCAMRQ8WWV6 532 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 RAB1BQ9H0U4 201 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 KCNK7Q9Y2U2 307 aa17.22■□□□□ 0.35
VCPKMT-203ENST00000484763 SERPINE3A8MV23 424 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 MELTFP08582 738 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 FUT3P21217 361 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 DUSP1P28562 367 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 HOXA4Q00056 320 aaPredicted RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 C6orf201Q7Z4U5 140 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 FAM90A1Q86YD7 464 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 YIPF5Q969M3 257 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 THAP7Q9BT49 309 aaPredicted RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 CACNG6Q9BXT2 260 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 IFT22Q9H7X7 185 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 SCPEP1Q9HB40 452 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 SPACA1Q9HBV2 294 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 TREM2Q9NZC2 230 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 RCC2Q9P258 522 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 LRBAP50851 2863 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 MEIOCA2RUB1 952 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 SULT1C2O00338 296 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 KNG1P01042 644 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 HPXP02790 462 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 IFITM3Q01628 133 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 PNLIPRP3Q17RR3 467 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 ATAD3CQ5T2N8 411 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 HACD4Q5VWC8 232 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 DNM1P46Q6ZS02 220 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 BOLLQ8N9W6 283 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 OR52I2Q8NH67 350 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 ST8SIA4Q92187 359 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 TRIM63Q969Q1 353 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 GLS2Q9UI32 602 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 ELF5Q9UKW6 265 aaPredicted RBP17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 PLEKHA6Q9Y2H5 1048 aa17.21■□□□□ 0.35
VCPKMT-203ENST00000484763 UTP20O75691 2785 aaKnown RBP17.21■□□□□ 0.34
VCPKMT-203ENST00000484763 IFNL4K9M1U5 179 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 CYB5R3P00387 301 aaPredicted RBP17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 LPLP06858 475 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 CD3GP09693 182 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 RBMXP38159 391 aaKnown RBP17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 GNG2P59768 71 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 STEAP3Q658P3 488 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 C20orf204Q6ZNR8 217 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 C1orf87Q8N0U7 546 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 SEH1LQ96EE3 360 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 PLEKHF2Q9H8W4 249 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 DNAJB11Q9UBS4 358 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 OR14J1Q9UGF5 321 aa17.2■□□□□ 0.34
VCPKMT-203ENST00000484763 IGHV1-69-2A0A0G2JMI3 117 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 A0A1W2PQ09 198 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 H7C417 338 aa17.19■□□□□ 0.34
VCPKMT-203ENST00000484763 SH2D1BO14796 132 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms