RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 RILPQ96NA2 401 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 OR2M4Q96R27 311 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TMED9Q9BVK6 235 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 GAL3ST2Q9H3Q3 398 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 FBXO44Q9H4M3 255 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 RDH14Q9HBH5 336 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ABCB9Q9NP78 766 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TUBG2Q9NRH3 451 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 TMEM100Q9NV29 134 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ZMAT5Q9UDW3 170 aaKnown RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 PRO0628Q9UI54 55 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ZNF443Q9Y2A4 671 aaPredicted RBP0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ACOT9Q9Y305 439 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 ELP1O95163 1332 aa0.8□□□□□ -2.28
SCAF11-207ENST00000484275 CEP170Q5SW79 1584 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 TRGV4A0A0C4DH28 118 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 SEC14L6B5MCN3 397 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 H0YC42 278 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 UPK1AO00322 258 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 IGHV3-53P01767 116 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 RHOCP08134 193 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 STAG3L2P0CL84 134 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 PTHLHP12272 177 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 PAX6P26367 422 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 ARR3P36575 388 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 LGALS7P47929 136 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 MLF1P58340 268 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 RPL31P62899 125 aaKnown RBP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 IFFO1Q0D2I5 559 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 LAMTOR4Q0VGL1 99 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 FOXF1Q12946 379 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 LINC00303Q3SY05 128 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 CLLU1OSQ5K130 101 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 CLEC12AQ5QGZ9 265 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 DUPD1Q68J44 220 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 FAM231DQ6ZW35 169 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 ITPRIPQ8IWB1 547 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 NELFCDQ8IXH7 590 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 CA13Q8N1Q1 262 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 RPRMLQ8N4K4 120 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 C3orf22Q8N5N4 141 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 ZDHHC22Q8N966 263 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 CYB561A3Q8NBI2 242 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 OR4K2Q8NGD2 314 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 OR6N2Q8NGY6 317 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 OR51A7Q8NH64 312 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 NT5CQ8TCD5 201 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 MITD1Q8WV92 249 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 KIAA1143Q96AT1 154 aaPredicted RBP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 ZNF707Q96C28 371 aaPredicted RBP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 SPACA5Q96QH8 159 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 BCL7BQ9BQE9 202 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 THTPAQ9BU02 230 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 MRPL20Q9BYC9 149 aaKnown RBP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 COA1Q9GZY4 146 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 OR2AG1Q9H205 316 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 CYP3A43Q9HB55 503 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 VCX3AQ9NNX9 186 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 TMEM38BQ9NVV0 291 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 RBM22Q9NW64 420 aaKnown RBP eCLIP0.79□□□□□ -2.28
SCAF11-207ENST00000484275 VAPAQ9P0L0 249 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 AP3M1Q9Y2T2 418 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 KLF12Q9Y4X4 402 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 KPTNQ9Y664 436 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 ARAP3Q8WWN8 1544 aa0.79□□□□□ -2.28
SCAF11-207ENST00000484275 STRCP1A6NGW2 1772 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 CHD2O14647 1828 aaKnown RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 CR1P17927 2039 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 FAM240AA0A1B0GVK7 77 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 IGLL5B9A064 214 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 E7EWF7 191 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 M0R1B8 84 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 UPK2O00526 184 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 FFAR1O14842 300 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 KDELR3O43731 214 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 GMDSO60547 372 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ALOX12BO75342 701 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 GZMHP20718 246 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 HTR2CP28335 458 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 TEAD1P28347 426 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 P2RY2P41231 377 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 TUFMP49411 452 aaKnown RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 KRTAP10-4P60372 401 aaPredicted RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 RPL10AP62906 217 aaKnown RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ELOCQ15369 112 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 IDNKQ5T6J7 187 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 EPGNQ6UW88 154 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 UGT2A3Q6UWM9 527 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 CLEC18BQ6UXF7 455 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ASCL4Q6XD76 172 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 SETD3Q86TU7 594 aaPredicted RBP0.78□□□□□ -2.28
SCAF11-207ENST00000484275 COMTD1Q86VU5 262 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 TMEM25Q86YD3 366 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 FAM58AQ8N1B3 248 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 ZNF321PQ8N8H1 164 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 OR52K1Q8NGK4 314 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 OR13C9Q8NGT0 318 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 OR5H2Q8NGV7 314 aa0.78□□□□□ -2.28
SCAF11-207ENST00000484275 OR6K2Q8NGY2 324 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms