RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 MDP1Q86V88 176 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 TGIF2LYQ8IUE0 185 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ZDHHC23Q8IYP9 409 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SLC30A7Q8NEW0 376 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 OR5D18Q8NGL1 313 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 OR8S1Q8NH09 359 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 IGFBPL1Q8WX77 278 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 AQP3Q92482 292 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 FBXW5Q969U6 566 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 MUCL1Q96DR8 90 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SEH1LQ96EE3 360 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 POM121L2Q96KW2 1035 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 Q96MF0 132 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 PAPOLGQ9BWT3 736 aaKnown RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SELENOIQ9C0D9 397 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 LPAR5Q9H1C0 372 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ESRP2Q9H6T0 727 aaKnown RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 CDH20Q9HBT6 801 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 MOV10Q9HCE1 1003 aaKnown RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 GPN1Q9HCN4 374 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 B3GNT2Q9NY97 397 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 NKIRAS2Q9NYR9 191 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 POU2F3Q9UKI9 436 aa5.92□□□□□ -1.46
BRCA1-216ENST00000484087 SETD2Q9BYW2 2564 aaPredicted RBP5.92□□□□□ -1.46
BRCA1-216ENST00000484087 ARFGEF3Q5TH69 2177 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MEIS3P1A6NDR6 274 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 NDUFB6O95139 128 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 HTR3BO95264 441 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 CD8AP01732 235 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 IFNA6P05013 189 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 CECR9P0C854 216 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 GNB3P16520 340 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 TBPP20226 339 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 IDH3GP51553 393 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 RPS27AP62979 156 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MRPS15P82914 257 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 CBX3Q13185 183 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MAB21L1Q13394 359 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ARFRP1Q13795 201 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 GK2Q14410 553 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ZMYND11Q15326 602 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MOGAT2Q3SYC2 334 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ACTBL2Q562R1 376 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 RNASE10Q5GAN6 216 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 METTL11BQ5VVY1 283 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 BIVMQ86UB2 503 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 C17orf78Q8N4C9 275 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF611Q8N823 705 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 PXT1Q8NFP0 134 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 OR56B2PQ8NGI1 322 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 OR4C16Q8NGL9 310 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 OR6F1Q8NGZ6 308 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MBD6Q96DN6 1003 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 MRPS24Q96EL2 167 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 RNF170Q96K19 258 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 SLC25A21Q9BQT8 299 aaPredicted RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 OR10A4Q9H209 315 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 BANF2Q9H503 90 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ZMAT3Q9HA38 289 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 OBP2BQ9NPH6 170 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 CISD1Q9NZ45 108 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 PTTG3PQ9NZH4 202 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
BRCA1-216ENST00000484087 CHD3Q12873 2000 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 ANK3Q12955 4377 aaKnown RBP5.91□□□□□ -1.46
BRCA1-216ENST00000484087 A0A0A6YYJ9 748 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 UBE2QL1A1L167 161 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 C7orf66A4D0T2 115 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 ZNF850A8MQ14 1090 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 SERPINE3A8MV23 424 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 H3BUI4 141 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 H7C1Q1 480 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 ARPC1BO15143 372 aaKnown RBP5.9□□□□□ -1.46
BRCA1-216ENST00000484087 SSNA1O43805 119 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 GOSR1O95249 250 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CST4P01036 141 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 GHRHP01286 108 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 IGHV4-39P01824 125 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CD3DP04234 171 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 AMY2AP04746 511 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CCL2P13500 99 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CD99P14209 185 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 HIST1H1DP16402 221 aaKnown RBP5.9□□□□□ -1.46
BRCA1-216ENST00000484087 SELEP16581 610 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 ANOS1P23352 680 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 BLVRBP30043 206 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CD83Q01151 205 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 MSMPQ1L6U9 139 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 ATAD3CQ5T2N8 411 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CD276Q5ZPR3 534 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM108Q6UXF1 575 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 C20orf204Q6ZNR8 217 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 C1orf174Q8IYL3 243 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 FAM89BQ8N5H3 189 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 ZSCAN4Q8NAM6 433 aaPredicted RBP5.9□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM104Q8NE00 496 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 CCDC107Q8WV48 283 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 TMEM171Q8WVE6 324 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 GIMAP1Q8WWP7 306 aa5.9□□□□□ -1.46
BRCA1-216ENST00000484087 MED30Q96HR3 178 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms