RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 HOXA4Q00056 320 aaPredicted RBP7.39□□□□□ -1.23
COL8A1-207ENST00000483969 SPHARQ15513 63 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 SMIM21Q3B7S5 101 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 Q499Y3 187 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 STUMQ69YW2 141 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 XAF1Q6GPH4 301 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 FIP1L1Q6UN15 594 aaKnown RBP7.39□□□□□ -1.23
COL8A1-207ENST00000483969 ACP7Q6ZNF0 438 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF788Q6ZQV5 615 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 SLC25A26Q70HW3 274 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 CALHM1Q8IU99 346 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 Q8IYB0 196 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 MS4A15Q8N5U1 240 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 PNLDC1Q8NA58 520 aaKnown RBP7.39□□□□□ -1.23
COL8A1-207ENST00000483969 OR13C9Q8NGT0 318 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 ANGPTL6Q8NI99 470 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 NANPQ8TBE9 248 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 SEH1LQ96EE3 360 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 CEP19Q96LK0 163 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 NRIP2Q9BQI9 281 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 NUDT16L1Q9BRJ7 211 aaKnown RBP7.39□□□□□ -1.23
COL8A1-207ENST00000483969 YTHDF1Q9BYJ9 559 aaKnown RBP7.39□□□□□ -1.23
COL8A1-207ENST00000483969 RHOFQ9HBH0 211 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 MMP26Q9NRE1 261 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 CKLFQ9UBR5 152 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 GLS2Q9UI32 602 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 AUP1Q9Y679 476 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 PLCE1Q9P212 2302 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 ARFGEF3Q5TH69 2177 aa7.39□□□□□ -1.23
COL8A1-207ENST00000483969 ARID1AO14497 2285 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 IGKV1-27A0A075B6S5 117 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 IGHV2-70DA0A0C4DH43 119 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 RFPL4AA6NLU0 287 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 RFPL4AL1F8VTS6 287 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 SIGLEC5O15389 551 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ENSAO43768 121 aaKnown RBP7.38□□□□□ -1.23
COL8A1-207ENST00000483969 MRPS14O60783 128 aaKnown RBP7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ALDOBP05062 364 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 CHRM2P08172 466 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 POU3F4P49335 361 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ERVK11-1P61568 191 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 PAX8Q06710 450 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 PDZK1IP1Q13113 114 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 GPR50Q13585 617 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 IRF3Q14653 427 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 MED22Q15528 200 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 KISS1Q15726 138 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 BTN2A1Q7KYR7 527 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 PRSS48Q7RTY5 328 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 SAXO1Q8IYX7 474 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ZFP41Q8N8Y5 198 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ZSCAN4Q8NAM6 433 aaPredicted RBP7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ST8SIA4Q92187 359 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 TMEM106AQ96A25 262 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 SLAMF9Q96A28 289 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 SDSLQ96GA7 329 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF488Q96MN9 340 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 GPER1Q99527 375 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 ISYNA1Q9NPH2 558 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 MTCH1Q9NZJ7 389 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 CTSZQ9UBR2 303 aa7.38□□□□□ -1.23
COL8A1-207ENST00000483969 TRBV5-5A0A0J9YX44 114 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PNMA8CA0A1B0GUJ8 204 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF879B4DU55 563 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 GPX5O75715 221 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 INMTO95050 263 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PPIAL4GP0DN37 164 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TMEM225BP0DP42 221 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 AMY2BP19961 511 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 MAPK3P27361 379 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 BDKRB2P30411 391 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TGFBR2P37173 567 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 BMXP51813 675 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 CAPZA1P52907 286 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 CAV3P56539 151 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PAX2Q02962 417 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TRAM1Q15629 374 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF529Q6P280 563 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 IL17RELQ6ZVW7 336 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 C1QL2Q7Z5L3 287 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 SATL1Q86VE3 508 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 FAM58AQ8N1B3 248 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF561Q8N587 486 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 FAM216BQ8N7L0 139 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TBC1D15Q8TC07 691 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 RGP1Q92546 391 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 UFD1Q92890 307 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 EMG1Q92979 244 aaKnown RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PGLYRP3Q96LB9 341 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 GAFA1Q96PS6 74 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 OR5M11Q96RB7 305 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 SEBOXQ9HB31 216 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 HES4Q9HCC6 221 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TMEM138Q9NPI0 162 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PCDHB16Q9NRJ7 776 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 PAK1IP1Q9NWT1 392 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 TAS2R4Q9NYW5 299 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 SLC25A10Q9UBX3 287 aaPredicted RBP7.37□□□□□ -1.23
COL8A1-207ENST00000483969 OR14J1Q9UGF5 321 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms