RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PMELP40967 661 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 MEOX2P50222 304 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 GTF2BQ00403 316 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 FMODQ06828 376 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ADIGQ0VDE8 80 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 PPP1R1AQ13522 171 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 KIAA0040Q15053 153 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 MAPK14Q16539 360 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 Q1RN00 199 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 KRTAP24-1Q3LI83 254 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 HES5Q5TA89 166 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 HACD4Q5VWC8 232 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 KDM4DQ6B0I6 523 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 OPN5Q6U736 354 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 RASSF6Q6ZTQ3 369 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 TMED4Q7Z7H5 227 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 MDP1Q86V88 176 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 COMMD7Q86VX2 200 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ZCCHC24Q8N2G6 241 aaKnown RBP3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ZNF525Q8N782 197 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-214ENST00000483925 ZNF680Q8NEM1 530 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 OR10G4Q8NGN3 311 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 DOK1Q99704 481 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 HSD17B10Q99714 261 aaKnown RBP3.26□□□□□ -1.89
PTCD3-214ENST00000483925 TMEM243Q9BU79 118 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 TIPINQ9BVW5 301 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 OR51E2Q9H255 320 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 VSIRQ9H7M9 311 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 GLTPQ9NZD2 209 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 TMEM9Q9P0T7 183 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 VPS29Q9UBQ0 182 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 RAB26Q9ULW5 256 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 POLR1DQ9Y2S0 133 aa3.26□□□□□ -1.89
PTCD3-214ENST00000483925 TRAV19A0A0A6YYK7 116 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 MMP23AO75900 390 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 SUPT7LO94864 414 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 MT-ND4P03905 459 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 HSPB1P04792 205 aaKnown RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 LINC00614P0C842 121 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 CRISP2P16562 243 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 HTR1EP28566 365 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 AGTR1P30556 359 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 PRSS3P35030 304 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 SSTR5P35346 364 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RIPPLY3P57055 190 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RPL23P62829 140 aaKnown RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 PNOCQ13519 176 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 IRF4Q15306 451 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RBMY1FQ15415 496 aaKnown RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RSPO1Q2MKA7 263 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 DNAJC24Q6P3W2 148 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 XKRXQ6PP77 449 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 Q6ZSR6 202 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 SLC51BQ86UW2 128 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 MUC15Q8N387 334 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 FAM172AQ8WUF8 416 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RDH5Q92781 318 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 RAD51AP1Q96B01 352 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 TMA16Q96EY4 203 aaKnown RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 TMEM101Q96IK0 257 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 ZIM3Q96PE6 472 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 ATOH8Q96SQ7 321 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 TIMM17AQ99595 171 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 MRPL20Q9BYC9 149 aaKnown RBP3.25□□□□□ -1.89
PTCD3-214ENST00000483925 SLC25A31Q9H0C2 315 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 WSB1Q9Y6I7 421 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 ENPP4Q9Y6X5 453 aa3.25□□□□□ -1.89
PTCD3-214ENST00000483925 CENPVL3A0A0U1RRI6 287 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 CLDN24A6NM45 220 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 DNASE2O00115 360 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 MFNGO00587 321 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 CCDC22O60826 627 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 SPAG7O75391 227 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 FOXH1O75593 365 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 RNF224P0DH78 156 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 ADORA1P30542 326 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 CCR7P32248 378 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 POLR2IP36954 125 aaKnown RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 TAS2R43P59537 309 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 CRADDP78560 199 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 ZNF235Q14590 738 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 PAFAH1B3Q15102 231 aaKnown RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 TAF1AQ15573 450 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 SLC9A3R2Q15599 337 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 Q499Y3 187 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 TCTEX1D4Q5JR98 221 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 HIST2H3PS2Q5TEC6 136 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 C1orf195Q5TG92 126 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 TSPO2Q5TGU0 170 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 SMIM15Q7Z3B0 74 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 ITPRIPQ8IWB1 547 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 LRRC25Q8N386 305 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 C14orf178Q8N769 122 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-214ENST00000483925 CLDN22Q8N7P3 220 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 SLC35G3Q8N808 338 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 WDSUB1Q8N9V3 476 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 KLHL30-AS1Q8NEE0 82 aa3.24□□□□□ -1.89
PTCD3-214ENST00000483925 EEF1AKMT1Q8WVE0 214 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms