RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 IL24Q13007 206 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 KIR2DS1Q14954 304 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 HLA-DRB5Q30154 266 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 RTN4RL2Q86UN3 420 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 STPG2Q8N412 459 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 COMMD1Q8N668 190 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 OR8U1Q8NH10 309 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 SLAMF9Q96A28 289 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 CEP19Q96LK0 163 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 CADM1Q9BY67 442 aaKnown RBP8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 TTTY10Q9BZA0 68 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 PKIBQ9C010 78 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 EDA2RQ9HAV5 297 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 ALMS1Q8TCU4 4167 aa8.52□□□□□ -1.05
SMARCC1-205ENST00000483847 HERC2O95714 4834 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 KIAA2026Q5HYC2 2103 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 IGKV1-27A0A075B6S5 117 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM230AA0A1W2PPH8 454 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A18PA6NE21 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A16PA6NEW6 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A20PA6NIJ5 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A9PA6NNJ1 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A12PA8MX19 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A5PA8MXJ8 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 DLGAP1O14490 977 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 KRT36O76013 467 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 CCNB2O95067 398 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 HAND1O96004 215 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 IGHG2P01859 326 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A15PP0C7V4 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A13PP0C7W8 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A14PP0C7W9 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM90A24PP0C7X0 464 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 FAM106CPP0CH98 169 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 PEX2P28328 305 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 CD34P28906 385 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 CEACAM3P40198 252 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 OR3A1P47881 315 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 P2RX3P56373 397 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 ESRRGP62508 458 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 RBM39Q14498 530 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 HNF4GQ14541 408 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 LCN1P1Q5VSP4 162 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 OR52W1Q6IF63 320 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 HEPN1Q6WQI6 88 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 SLC35E3Q7Z769 313 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 OR56B4Q8NH76 319 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 ITFG2Q969R8 447 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 SPAG4Q9NPE6 437 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 DNAJB9Q9UBS3 223 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 NUFIP1Q9UHK0 495 aaKnown RBP8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 LAMP5Q9UJQ1 280 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 UBE2J1Q9Y385 318 aaPredicted RBP8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 U3KQV3 271 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 V9GYS6 101 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 SORL1Q92673 2214 aa8.51□□□□□ -1.05
SMARCC1-205ENST00000483847 PCLOQ9Y6V0 5065 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 A0A1B0GTI1 187 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 TOR1AO14656 332 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 ARPC2O15144 300 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 HCKP08631 526 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 CALCBP10092 127 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 MNDAP41218 407 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 CDX1P47902 265 aaPredicted RBP8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 SNU13P55769 128 aaKnown RBP8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 ZNF91Q05481 1191 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 FHL3Q13643 280 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 DIAPH2-AS1Q14236 149 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 HES1Q14469 280 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 TEX38Q6PEX7 206 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 THNSL2Q86YJ6 484 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 DRAM1Q8N682 238 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 BBS1Q8NFJ9 593 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 OR14K1Q8NGZ2 314 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 EMG1Q92979 244 aaKnown RBP8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 NSMCE2Q96MF7 247 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 DGCR6LQ9BY27 220 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 GAL3ST2Q9H3Q3 398 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 ZMAT4Q9H898 229 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
SMARCC1-205ENST00000483847 FRAS1Q86XX4 4008 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 A0A1W2PPI3 338 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 OOSP1A8MZH6 123 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 PRR23D1E9PI22 279 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 MGST3O14880 152 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 PRODHO43272 600 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 SRSF10O75494 262 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 PRR23D2P0DMB1 279 aaPredicted RBP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 TMEM11P17152 192 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 ERP29P30040 261 aaKnown RBP8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 GLIPR1P48060 266 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 NPBWR2P48146 333 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 PNLIPRP3Q17RR3 467 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 SLX4IPQ5VYV7 408 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 CCDC144NLQ6NUI1 221 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 DEGS2Q6QHC5 323 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 C16orf89Q6UX73 402 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 SLC25A26Q70HW3 274 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 CPOQ8IVL8 374 aa8.49□□□□□ -1.05
SMARCC1-205ENST00000483847 FOXRED2Q8IWF2 684 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms