RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 LINC00596Q86U02 117 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 OR5M8Q8NGP6 311 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 SLC25A40Q8TBP6 338 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 FAM57AQ8TBR7 257 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 RHOFQ9HBH0 211 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 MSRB2Q9Y3D2 182 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 OR5H1A6NKK0 313 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 SYNGR1O43759 233 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 GFRA3O60609 400 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 OR7C1O76099 320 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 DUS4LO95620 317 aaKnown RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 PPP3CBP16298 524 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 HAGHLQ6PII5 290 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 FAM180AQ6UWF9 173 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 BHLHA15Q7RTS1 189 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 TMEM230Q96A57 120 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 HS3ST6Q96QI5 342 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
CPNE1-225ENST00000483495 C12orf4Q9NQ89 552 aa11.32□□□□□ -0.6
CPNE1-225ENST00000483495 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
CPNE1-225ENST00000483495 OR5H14A6NHG9 310 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 J3QT63 122 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 AGFG2O95081 481 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 CECR9P0C854 216 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 AKR1C4P17516 323 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 CEACAM8P31997 349 aaPredicted RBP11.31□□□□□ -0.6
CPNE1-225ENST00000483495 ARPC4P59998 168 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 ERVS71-1P61550 626 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 SRSF7Q16629 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
CPNE1-225ENST00000483495 TBR1Q16650 682 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 C11orf88Q6PI97 169 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 DHRS11Q6UWP2 260 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 UNQ6126/PRO20091Q6UXV3 157 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 OR1J1Q8NGS3 322 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 DYRK2Q92630 601 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 MARS2Q96GW9 593 aaKnown RBP11.31□□□□□ -0.6
CPNE1-225ENST00000483495 CCDC120Q96HB5 630 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 PHB2Q99623 299 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 SLX1AQ9BQ83 275 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 RTL8AQ9BWD3 113 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 LUZP4Q9P127 313 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 TP53TG5Q9Y2B4 290 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 AMDHD2Q9Y303 409 aa11.31□□□□□ -0.6
CPNE1-225ENST00000483495 DBX1A6NMT0 343 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 HMSDA8MTL9 139 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 CD8AP01732 235 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 OPRM1P35372 400 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 PSG7Q13046 419 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 IL13RA2Q14627 380 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 PDCD1Q15116 288 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 Q6ZPA2 131 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 Q6ZS49 121 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 SLC7A5P1Q8MH63 180 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 RPRMLQ8N4K4 120 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 KLF14Q8TD94 323 aaPredicted RBP11.3□□□□□ -0.6
CPNE1-225ENST00000483495 DHRS9Q9BPW9 319 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 MICU1Q9BPX6 476 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 SFXN3Q9BWM7 321 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF442Q9H7R0 627 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 NECAP2Q9NVZ3 263 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 SLC25A15Q9Y619 301 aa11.3□□□□□ -0.6
CPNE1-225ENST00000483495 A0A0B4J2A0 478 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 LRP5LA4QPB2 252 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 OR5H8P0DN80 308 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 LIN54Q6MZP7 749 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF474Q6S9Z5 364 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 WDR86Q86TI4 376 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 BATF2Q8N1L9 274 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 Q8NA96 180 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 GTF3AQ92664 365 aaKnown RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 EXTL1Q92935 676 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 C1QTNF6Q9BXI9 259 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 IFT22Q9H7X7 185 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 SLC23A1Q9UHI7 598 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 SHPKQ9UHJ6 478 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 IGHV1-18A0A0C4DH31 117 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 SFT2D2O95562 160 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 NAPSAO96009 420 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 RPS2P15880 293 aaKnown RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 NFYAP23511 347 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 VAMP1P23763 118 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 CALCRP30988 508 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 ZNF81P51508 661 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 SUPT4H1P63272 117 aaKnown RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 BCL2L14Q9BZR8 327 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 IL36RNQ9UBH0 155 aa11.29□□□□□ -0.6
CPNE1-225ENST00000483495 PRRC2CQ9Y520 2896 aaKnown RBP11.29□□□□□ -0.6
CPNE1-225ENST00000483495 IGHV2OR16-5A0A0B4J2B6 119 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 MCRIP1C9JLW8 97 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 GLAP06280 429 aa11.28□□□□□ -0.6
CPNE1-225ENST00000483495 PRKACAP17612 351 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms