RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ACTA2P62736 377 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ACTG1P63261 375 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ACTG2P63267 376 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ACTC1P68032 377 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ACTA1P68133 377 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 HBA1P69905 142 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 PITPNAQ00169 270 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 GLO1Q04760 184 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 LOXL1Q08397 574 aaPredicted RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 MADCAM1Q13477 382 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZNF141Q15928 474 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZNF74Q16587 644 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 HAGHQ16775 308 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 TMEM249Q2WGJ8 235 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 PIK3CD-AS1Q5SR53 167 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 BEND6Q5SZJ8 279 aaPredicted RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZNF544Q6NX49 715 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 STEAP1BQ6NZ63 245 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 GRINAQ7Z429 371 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 C6orf120Q7Z4R8 191 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 KRTCAP2Q8N6L1 136 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZNF525Q8N782 197 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZNF433Q8N7K0 673 aaPredicted RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 PRR26Q8N8Z3 221 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 LGALS14Q8TCE9 139 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 DNAJA3Q96EY1 480 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 TNFRSF13CQ96RJ3 184 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 URM1Q9BTM9 101 aaKnown RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 ULBP2Q9BZM5 246 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 SHARPINQ9H0F6 387 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 OR51I1Q9H343 314 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 WDR55Q9H6Y2 383 aaPredicted RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 MAP6D1Q9H9H5 199 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 FKRPQ9H9S5 495 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZC4H2Q9NQZ6 224 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ZDHHC2Q9UIJ5 367 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 PURGQ9UJV8 347 aaKnown RBP5.41□□□□□ -1.54
CLK1-212ENST00000482590 AMDHD2Q9Y303 409 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 HDGFL3Q9Y3E1 203 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 ANK2Q01484 3957 aa5.41□□□□□ -1.54
CLK1-212ENST00000482590 IGKV3D-15A0A087WSY6 115 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 A0A1B0GTI1 187 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CENPXA8MT69 81 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 A8MVM7 634 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 E7EQL1 145 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 G3V4G9 280 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 H3BNX3 289 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 H7C417 338 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SPAG7O75391 227 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 HSBP1O75506 76 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CPSF4O95639 269 aaKnown RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 TSPAN13O95857 204 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 TOMM40O96008 361 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CA1P00915 261 aaPredicted RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 IFNW1P05000 195 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 PSG1P11464 419 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 H2AFXP16104 143 aaPredicted RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 FKBP2P26885 142 aaKnown RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 HTR2CP28335 458 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 MAGEA2P43356 314 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CEBPGP53567 150 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SNRPD2P62316 118 aaKnown RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 VLDLRP98155 873 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 TGFBR3Q03167 851 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 ARHGAP11BQ3KRB8 267 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SAMD4BQ5PRF9 694 aaKnown RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 DDI2Q5TDH0 399 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 TYW3Q6IPR3 259 aaKnown RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 C11orf71Q6IPW1 123 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 ACSM5Q6NUN0 579 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 TNFAIP8L2Q6P589 184 aaPredicted RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 Q6ZSR3 168 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 OLIG3Q7RTU3 272 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SLC35F2Q8IXU6 374 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CLECL1Q8IZS7 167 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 DHRSXQ8N5I4 330 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 C8orf46Q8TAG6 207 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 PLPPR1Q8TBJ4 325 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 PHLDA1Q8WV24 401 aaPredicted RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 DDIT4LQ96D03 193 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 RNF170Q96K19 258 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 ECSITQ9BQ95 431 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 NIPSNAP3BQ9BS92 247 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 BEX2Q9BXY8 128 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 DPY30Q9C005 99 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 A4GALTQ9NPC4 353 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CTPS2Q9NRF8 586 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 ACER3Q9NUN7 267 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 TMEM181Q9P2C4 612 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 MARCOQ9UEW3 520 aaPredicted RBP5.4□□□□□ -1.54
CLK1-212ENST00000482590 KCNS2Q9ULS6 477 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SLC25A15Q9Y619 301 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 CDH10Q9Y6N8 788 aa5.4□□□□□ -1.54
CLK1-212ENST00000482590 SVEP1Q4LDE5 3571 aa5.39□□□□□ -1.55
CLK1-212ENST00000482590 TRBV5-3A0A0A0MS03 114 aa5.39□□□□□ -1.55
CLK1-212ENST00000482590 TMED7-TICAM2A0A0A6YYA0 188 aa5.39□□□□□ -1.55
CLK1-212ENST00000482590 ATP6V1G2-DDX39BF2Z307 99 aa5.39□□□□□ -1.55
CLK1-212ENST00000482590 H3BN98 237 aa5.39□□□□□ -1.55
CLK1-212ENST00000482590 EIF1BO60739 113 aaKnown RBP5.39□□□□□ -1.55
CLK1-212ENST00000482590 KHDRBS3O75525 346 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms