RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 TM4SF18Q96CE8 201 aa2.55□□□□□ -2
SMC6-208ENST00000481708 VCX3AQ9NNX9 186 aa2.55□□□□□ -2
SMC6-208ENST00000481708 TMEM100Q9NV29 134 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SAR1BQ9Y6B6 198 aa2.55□□□□□ -2
SMC6-208ENST00000481708 PTPRQQ9UMZ3 2332 aa2.55□□□□□ -2
SMC6-208ENST00000481708 IGF2RP11717 2491 aa2.55□□□□□ -2
SMC6-208ENST00000481708 A6NIZ1 184 aa2.55□□□□□ -2
SMC6-208ENST00000481708 B4DXG7 233 aa2.55□□□□□ -2
SMC6-208ENST00000481708 PHF1O43189 567 aaPredicted RBP2.55□□□□□ -2
SMC6-208ENST00000481708 RAD1O60671 282 aa2.55□□□□□ -2
SMC6-208ENST00000481708 HPGDSO60760 199 aa2.55□□□□□ -2
SMC6-208ENST00000481708 RAB36O95755 333 aa2.55□□□□□ -2
SMC6-208ENST00000481708 TYMSP04818 313 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ESDP10768 282 aa2.55□□□□□ -2
SMC6-208ENST00000481708 IGHV1-2P23083 117 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ADORA2BP29275 332 aa2.55□□□□□ -2
SMC6-208ENST00000481708 HNRNPA3P51991 378 aaKnown RBP2.55□□□□□ -2
SMC6-208ENST00000481708 RAP1BP61224 184 aa2.55□□□□□ -2
SMC6-208ENST00000481708 CEACAM16Q2WEN9 425 aa2.55□□□□□ -2
SMC6-208ENST00000481708 DCST2Q5T1A1 773 aa2.55□□□□□ -2
SMC6-208ENST00000481708 IRAK1BP1Q5VVH5 260 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ACOT7LQ6ZUV0 252 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SSX6Q7RTT6 188 aa2.55□□□□□ -2
SMC6-208ENST00000481708 BMFQ96LC9 184 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ARV1Q9H2C2 271 aa2.55□□□□□ -2
SMC6-208ENST00000481708 TAS2R7Q9NYW3 318 aa2.55□□□□□ -2
SMC6-208ENST00000481708 THYN1Q9P016 225 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SLC22A13Q9Y226 551 aa2.55□□□□□ -2
SMC6-208ENST00000481708 BTRCQ9Y297 605 aa2.55□□□□□ -2
SMC6-208ENST00000481708 DSPP15924 2871 aaKnown RBP2.55□□□□□ -2
SMC6-208ENST00000481708 DNAH8Q96JB1 4490 aa2.55□□□□□ -2
SMC6-208ENST00000481708 PI4KAP42356 2102 aa2.55□□□□□ -2
SMC6-208ENST00000481708 IGLV3-12A0A075B6K2 115 aa2.55□□□□□ -2
SMC6-208ENST00000481708 C15orf61A6NNL5 157 aa2.55□□□□□ -2
SMC6-208ENST00000481708 REG1AP05451 166 aa2.55□□□□□ -2
SMC6-208ENST00000481708 OR8U9P0C7N5 309 aa2.55□□□□□ -2
SMC6-208ENST00000481708 C8orf88P0DMB2 117 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ELK3P41970 407 aa2.55□□□□□ -2
SMC6-208ENST00000481708 PAX9P55771 341 aa2.55□□□□□ -2
SMC6-208ENST00000481708 PUDPQ08623 228 aa2.55□□□□□ -2
SMC6-208ENST00000481708 RFX4Q33E94 735 aa2.55□□□□□ -2
SMC6-208ENST00000481708 TFAP2EQ6VUC0 442 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SMIM29Q86T20 159 aa2.55□□□□□ -2
SMC6-208ENST00000481708 HORMAD1Q86X24 394 aa2.55□□□□□ -2
SMC6-208ENST00000481708 OR51G1Q8NGK1 321 aa2.55□□□□□ -2
SMC6-208ENST00000481708 OR8U1Q8NH10 309 aa2.55□□□□□ -2
SMC6-208ENST00000481708 OR10J5Q8NHC4 309 aa2.55□□□□□ -2
SMC6-208ENST00000481708 MCOLN3Q8TDD5 553 aa2.55□□□□□ -2
SMC6-208ENST00000481708 FGGYQ96C11 551 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ATXN7L3BQ96GX2 97 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SORCS2Q96PQ0 1159 aa2.55□□□□□ -2
SMC6-208ENST00000481708 SRXN1Q9BYN0 137 aa2.55□□□□□ -2
SMC6-208ENST00000481708 WDR13Q9H1Z4 485 aa2.55□□□□□ -2
SMC6-208ENST00000481708 ZNF385DQ9H6B1 395 aa2.55□□□□□ -2
SMC6-208ENST00000481708 RAB23Q9ULC3 237 aa2.55□□□□□ -2
SMC6-208ENST00000481708 IGHV1OR21-1A0A087WYE8 117 aa2.54□□□□□ -2
SMC6-208ENST00000481708 PVALEFA0A1B0GWK0 134 aa2.54□□□□□ -2
SMC6-208ENST00000481708 C2orf74A8MZ97 194 aa2.54□□□□□ -2
SMC6-208ENST00000481708 KMOO15229 486 aa2.54□□□□□ -2
SMC6-208ENST00000481708 C2P06681 752 aa2.54□□□□□ -2
SMC6-208ENST00000481708 GGT1P19440 569 aa2.54□□□□□ -2
SMC6-208ENST00000481708 RPL29P47914 159 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 FGF8P55075 233 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 CACNG7P62955 275 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ECH1Q13011 328 aa2.54□□□□□ -2
SMC6-208ENST00000481708 FAM53BQ14153 422 aa2.54□□□□□ -2
SMC6-208ENST00000481708 OR7A5Q15622 319 aa2.54□□□□□ -2
SMC6-208ENST00000481708 POU2AF1Q16633 256 aa2.54□□□□□ -2
SMC6-208ENST00000481708 LRRC75BQ2VPJ9 315 aa2.54□□□□□ -2
SMC6-208ENST00000481708 KIAA1644Q3SXP7 199 aa2.54□□□□□ -2
SMC6-208ENST00000481708 DNM1P34Q6PK57 102 aa2.54□□□□□ -2
SMC6-208ENST00000481708 LYG2Q86SG7 212 aa2.54□□□□□ -2
SMC6-208ENST00000481708 TAC4Q86UU9 113 aa2.54□□□□□ -2
SMC6-208ENST00000481708 CPNE9Q8IYJ1 553 aa2.54□□□□□ -2
SMC6-208ENST00000481708 GPR26Q8NDV2 337 aa2.54□□□□□ -2
SMC6-208ENST00000481708 OR2V1Q8NHB1 315 aa2.54□□□□□ -2
SMC6-208ENST00000481708 TCEAL3Q969E4 200 aa2.54□□□□□ -2
SMC6-208ENST00000481708 TLCD1Q96CP7 247 aa2.54□□□□□ -2
SMC6-208ENST00000481708 PLCXD1Q9NUJ7 323 aa2.54□□□□□ -2
SMC6-208ENST00000481708 NAV3Q8IVL0 2385 aa2.54□□□□□ -2
SMC6-208ENST00000481708 APCP25054 2843 aa2.54□□□□□ -2
SMC6-208ENST00000481708 TRGV8A0A0C4DH27 118 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ZNF207O43670 478 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 PAEPP09466 180 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ERGP11308 486 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ATP6V1B2P21281 511 aa2.54□□□□□ -2
SMC6-208ENST00000481708 IL12AP29459 219 aa2.54□□□□□ -2
SMC6-208ENST00000481708 CRYBA4P53673 196 aa2.54□□□□□ -2
SMC6-208ENST00000481708 NDUFV3P56181 108 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 FAM3AP98173 230 aa2.54□□□□□ -2
SMC6-208ENST00000481708 KIAA0141Q14154 515 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 FASTKQ14296 549 aaKnown RBP2.54□□□□□ -2
SMC6-208ENST00000481708 C14orf28Q4W4Y0 310 aa2.54□□□□□ -2
SMC6-208ENST00000481708 NPSR1Q6W5P4 371 aa2.54□□□□□ -2
SMC6-208ENST00000481708 MBOAT2Q6ZWT7 520 aa2.54□□□□□ -2
SMC6-208ENST00000481708 OR5B17Q8NGF7 314 aa2.54□□□□□ -2
SMC6-208ENST00000481708 ZMYND19Q96E35 227 aaPredicted RBP2.54□□□□□ -2
SMC6-208ENST00000481708 PGLYRP4Q96LB8 373 aa2.54□□□□□ -2
SMC6-208ENST00000481708 KCTD7Q96MP8 289 aa2.54□□□□□ -2
SMC6-208ENST00000481708 KCNJ16Q9NPI9 418 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms