RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 PYDC2Q56P42 97 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 TEX36Q5VZQ5 186 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 OR10K2Q6IF99 312 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 MOGAT3Q86VF5 341 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 GCSAMQ8N6F7 178 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 OR10K1Q8NGX5 313 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 PPP1R35Q8TAP8 253 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 SMIM4Q8WVI0 70 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 FCAMRQ8WWV6 532 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 RDH5Q92781 318 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 RIMS4Q9H426 269 aaPredicted RBP8.57□□□□□ -1.04
USP39-215ENST00000481409 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 UBTD1Q9HAC8 227 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 PLEKHJ1Q9NW61 149 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 RBFOX1Q9NWB1 397 aaKnown RBP8.57□□□□□ -1.04
USP39-215ENST00000481409 RCC2Q9P258 522 aaKnown RBP8.57□□□□□ -1.04
USP39-215ENST00000481409 RALYQ9UKM9 306 aaKnown RBP8.57□□□□□ -1.04
USP39-215ENST00000481409 TANC2Q9HCD6 1990 aa8.57□□□□□ -1.04
USP39-215ENST00000481409 TRAV18A0A075B6X5 111 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 TRAV38-1A0A0B4J264 116 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 A0A0G2JMP0 313 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 A0A0X1KG70 313 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 TMEM178BH3BS89 294 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 PYCARD-AS1I3L0S3 204 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 OVOL3O00110 214 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 MFNGO00587 321 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 OR7C1O76099 320 aaPredicted RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 ECDO95905 644 aaPredicted RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 LPLP06858 475 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 SOD3P08294 240 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 GSTT2BP0CG30 244 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 CHATP28329 748 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 AP3S2P59780 193 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 ACTBP60709 375 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 ACTG1P63261 375 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 MRPS15P82914 257 aaKnown RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 PAX5Q02548 391 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 DCTN2Q13561 401 aaKnown RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 ZNF79Q15937 498 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 SRSF7Q16629 238 aaKnown RBP eCLIP8.56□□□□□ -1.04
USP39-215ENST00000481409 MICBQ29980 383 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 PEG10Q86TG7 708 aaKnown RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 Q8N402 240 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 OR4M2Q8NGB6 313 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 IGFBPL1Q8WX77 278 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 NKX3-1Q99801 234 aaPredicted RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 VRK1Q99986 396 aaPredicted RBP8.56□□□□□ -1.04
USP39-215ENST00000481409 CACNG6Q9BXT2 260 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 CHST6Q9GZX3 395 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 AUNIPQ9H7T9 357 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 TMEM106BQ9NUM4 274 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 UFSP2Q9NUQ7 469 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 NLKQ9UBE8 527 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 DNAJB11Q9UBS4 358 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 LAMP3Q9UQV4 416 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 ARFGEF3Q5TH69 2177 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 CHD6Q8TD26 2715 aa8.56□□□□□ -1.04
USP39-215ENST00000481409 A0A0A6YYD4 124 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 A0A1W2PP11 408 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 MCRIP1C9JLW8 97 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 LGALS8O00214 317 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 DEGS1O15121 323 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 SOCS1O15524 211 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 UPK1BO75841 260 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 F12P00748 615 aaPredicted RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 CSN2P05814 226 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 PAX1P15863 534 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 DTYMKP23919 212 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 GABRR1P24046 479 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 EFNA4P52798 201 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 TMEM50BP56557 158 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 TMEM33P57088 247 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 SCN1BQ07699 218 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 PLA2G7Q13093 441 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 TAF9Q16594 264 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 PIGYQ3MUY2 71 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 CDNFQ49AH0 187 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 ATPAF1Q5TC12 328 aaPredicted RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 ZNF826PQ6ZT77 177 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 MUC20Q8N307 709 aaPredicted RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 ZNF561Q8N587 486 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 SETD6Q8TBK2 473 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 ST8SIA4Q92187 359 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 ABHD1Q96SE0 405 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 NICN1Q9BSH3 213 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 PECRQ9BY49 303 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 FAM234AQ9H0X4 552 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 KCNK15Q9H427 330 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 NCOR1P1Q9H4R4 102 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 BARX1Q9HBU1 254 aaPredicted RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 MGAT4AQ9UM21 535 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 MRPS7Q9Y2R9 242 aaKnown RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 RBMX2Q9Y388 322 aaKnown RBP8.55□□□□□ -1.04
USP39-215ENST00000481409 WIPI2Q9Y4P8 454 aa8.55□□□□□ -1.04
USP39-215ENST00000481409 CHD3Q12873 2000 aaKnown RBP8.54□□□□□ -1.04
USP39-215ENST00000481409 MYO18BQ8IUG5 2567 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms