RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 D6RAR5 112 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 FXYD1O00168 92 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CASC3O15234 703 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 CHST10O43529 356 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 SCN2BO60939 215 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 DNAJB6O75190 326 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 RDH16O75452 317 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 MED6O75586 246 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 OR2B3O76000 313 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 SCELO95171 688 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 GPR75O95800 540 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 AIFM1O95831 613 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 C6orf47O95873 294 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 GP1BAP07359 652 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 IGKV1-13P0DP09 117 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 FOLR1P15328 257 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 IL1RNP18510 177 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 NELFEP18615 380 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 CSNK2A2P19784 350 aaPredicted RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 CPN2P22792 545 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ME2P23368 584 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 MPIP34949 423 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 GABRA4P48169 554 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 TFPI2P48307 235 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 XKP51811 444 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 NCBP2P52298 156 aaKnown RBP eCLIP2.4□□□□□ -2.03
CBX3-207ENST00000481300 SKP1P63208 163 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ELF3P78545 371 aaPredicted RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 MRPS22P82650 360 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 ZNF92Q03936 586 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 LIPEQ05469 1076 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 LRRC74AQ0VAA2 488 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 FAM53BQ14153 422 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 NANOGP8Q6NSW7 305 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 NIPAL1Q6NVV3 410 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 RNASEKQ6P5S7 137 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 ARPINQ7Z6K5 226 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 PCP2Q8IVA1 136 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 MSRB3Q8IXL7 192 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 C10orf67Q8IYJ2 551 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CLECL1Q8IZS7 167 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 PGAM4Q8N0Y7 254 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CA13Q8N1Q1 262 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 NATD1Q8N6N6 113 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 TRIML2Q8N7C3 387 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 OR8J2Q8NGG1 315 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 OR5T3Q8NGG3 340 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 AKR7LQ8NHP1 331 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 OR5P2Q8WZ92 322 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CIDECQ96AQ7 238 aaPredicted RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 CCDC124Q96CT7 223 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 PANX1Q96RD7 426 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ZNF717Q9BY31 904 aaPredicted RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 SLC7A5P2Q9GIP4 190 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 TPK1Q9H3S4 243 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 RPF2Q9H7B2 306 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 FANCEQ9HB96 536 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 LYRM4Q9HD34 91 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CMTM6Q9NX76 183 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 MS4A12Q9NXJ0 267 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 TAS2R7Q9NYW3 318 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 CES1P1Q9UKY3 287 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 PSG11Q9UQ72 335 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 AP3M1Q9Y2T2 418 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ZNF780BQ9Y6R6 833 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 GPR179Q6PRD1 2367 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 MUC22E2RYF6 1773 aaPredicted RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 NUP205Q92621 2012 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ANAPC1Q9H1A4 1944 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 DOCK8Q8NF50 2099 aa2.4□□□□□ -2.03
CBX3-207ENST00000481300 ZNF638Q14966 1978 aaKnown RBP2.4□□□□□ -2.03
CBX3-207ENST00000481300 NUP210Q8TEM1 1887 aaPredicted RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 PRUNE2Q8WUY3 3088 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 MYO9BQ13459 2157 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 A0A1B0GX78 115 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 PRORSD1PA6NEY8 169 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ZNF726A6NNF4 738 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 EVPLLA8MZ36 301 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 NME4O00746 187 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 POLR1CO15160 346 aaPredicted RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 CD5LO43866 347 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CTNSO60931 367 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 NSA2O95478 260 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 KRT75O95678 551 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CCL4P13236 92 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CPMP14384 443 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 PPIBP23284 216 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 NBL1P41271 181 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CDKN2CP42773 168 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CRATP43155 626 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 CYB561P49447 251 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 RAB38P57729 211 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 MTPNP58546 118 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 HBA1P69905 142 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 DCDP81605 110 aaKnown RBP2.39□□□□□ -2.03
CBX3-207ENST00000481300 STX4Q12846 297 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 BNIP2Q12982 314 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ECH1Q13011 328 aa2.39□□□□□ -2.03
CBX3-207ENST00000481300 ILKQ13418 452 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms