RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 ANGPTL5Q86XS5 388 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 OR5A2Q8NGI9 324 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF671Q8TAW3 534 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 TRMT10AQ8TBZ6 339 aaKnown RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 NPRL2Q8WTW4 380 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 AQP3Q92482 292 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 NEIL1Q96FI4 390 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 CCL13Q99616 98 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 CHST5Q9GZS9 411 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 PPIL3Q9H2H8 161 aaKnown RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 PCDHB16Q9NRJ7 776 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 GHRLQ9UBU3 117 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 MIOXQ9UGB7 285 aa10.17□□□□□ -0.78
PTPRF-213ENST00000481019 POLR3KQ9Y2Y1 108 aaPredicted RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 AK6Q9Y3D8 172 aaKnown RBP10.17□□□□□ -0.78
PTPRF-213ENST00000481019 IGKV1-9A0A0C4DH69 117 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 C22orf46C9J442 243 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 ADAM20O43506 726 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 FOXH1O75593 365 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 FAM157CP0CG43 387 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 SELLP14151 372 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 TALDO1P37837 337 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 PITPNBP48739 271 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 DCAF12L2Q5VW00 463 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF529Q6P280 563 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 HAGHLQ6PII5 290 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-213ENST00000481019 LRRTM1Q86UE6 522 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 CALHM1Q8IU99 346 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 FAM216BQ8N7L0 139 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 DNAAF1Q8NEP3 725 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 OR8B3Q8NGG8 313 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 OR6M1Q8NGM8 313 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 OR10Z1Q8NGY1 313 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 C15orf40Q8WUR7 153 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 OR8B2Q96RD0 313 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 SSBP3Q9BWW4 388 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-213ENST00000481019 WDR12Q9GZL7 423 aaKnown RBP10.16□□□□□ -0.78
PTPRF-213ENST00000481019 TAS2R4Q9NYW5 299 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 STEAP1Q9UHE8 339 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 DAPK2Q9UIK4 370 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 ETV7Q9Y603 341 aa10.16□□□□□ -0.78
PTPRF-213ENST00000481019 COL6A5A8TX70 2615 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 TRAV38-1A0A0B4J264 116 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 A0A0G2JMP0 313 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 A0A0X1KG70 313 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 FAM230AA0A1W2PPH8 454 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 OR5B21A6NL26 309 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 F8VVB4 439 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 F8VWA3 439 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 SLC17A2O00624 439 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 HCKP08631 526 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 CLEC2LP0C7M8 214 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 UBBP0CG47 229 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 CD37P11049 281 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 SRD5A1P18405 259 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 ATF1P18846 271 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF93P35789 620 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-213ENST00000481019 BMXP51813 675 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 FUT6P51993 359 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 ZNF45Q02386 682 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 RAB11BQ15907 218 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 ESCO2Q56NI9 601 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 STUMQ69YW2 141 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 CRIP3Q6Q6R5 217 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 METAP1DQ6UB28 335 aaPredicted RBP10.15□□□□□ -0.78
PTPRF-213ENST00000481019 LHFPL2Q6ZUX7 228 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 OR4M2Q8NGB6 313 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 OR6Q1Q8NGQ2 317 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 GPER1Q99527 375 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 S100A13Q99584 98 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 C7orf69Q9H7B7 122 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 LPAR3Q9UBY5 353 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 SPATA2Q9UM82 520 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 INSIG2Q9Y5U4 225 aa10.15□□□□□ -0.78
PTPRF-213ENST00000481019 IGKV1D-17A0A075B6S4 117 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 TRAV8-7A0A075B6U6 113 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 SHISA3A0PJX4 238 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 DVL1O14640 695 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 SCGNO76038 276 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 TPPPO94811 219 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 FSHBP01225 129 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 PTBP1P26599 531 aaKnown RBP eCLIP10.14□□□□□ -0.795e-8■■■■□ 21.9
PTPRF-213ENST00000481019 HTR2CP28335 458 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 HAAOP46952 286 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 RBP2P50120 134 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 ATP1B3P54709 279 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 GNB2P62879 340 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 ZNF846Q147U1 533 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 KLF17Q5JT82 389 aaPredicted RBP10.14□□□□□ -0.79
PTPRF-213ENST00000481019 C1orf100Q5SVJ3 147 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 ASPHD2Q6ICH7 369 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 JAGN1Q8N5M9 183 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 OR13C9Q8NGT0 318 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 TBC1D15Q8TC07 691 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 RAB40AQ8WXH6 277 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 PTX4Q96A99 478 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 PHF21AQ96BD5 680 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 BORCS8Q96FH0 119 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 WDFY2Q96P53 400 aa10.14□□□□□ -0.79
PTPRF-213ENST00000481019 GAFA1Q96PS6 74 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms