RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 DUX4Q9UBX2 424 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 STUB1Q9UNE7 303 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 MAB21L2Q9Y586 359 aa16.39■□□□□ 0.21
LIME1-205ENST00000480139 J3QLI3 93 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 CHRM2P08172 466 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 RSU1Q15404 277 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 GLT8D1Q68CQ7 371 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 S100A13Q99584 98 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 FAM234AQ9H0X4 552 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 METTL9Q9H1A3 318 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 PCDHB16Q9NRJ7 776 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 OR14J1Q9UGF5 321 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 GLS2Q9UI32 602 aa16.38■□□□□ 0.21
LIME1-205ENST00000480139 LOC105371242A0A075B767 164 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 TRAV1-2A0A0B4J238 106 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 IGHV2-70DA0A0C4DH43 119 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 TFF1P04155 84 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 IKZF1Q13422 519 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 GPR176Q14439 515 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 NHLRC3Q5JS37 347 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 C1orf100Q5SVJ3 147 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 DCAF12L2Q5VW00 463 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 Q71RC1 249 aaPredicted RBP16.37■□□□□ 0.21
LIME1-205ENST00000480139 ZNRF1Q8ND25 227 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 OR51T1Q8NGJ9 327 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 TBC1D15Q8TC07 691 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 RAB40AQ8WXH6 277 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 DMRTB1Q96MA1 342 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 NKX3-1Q99801 234 aaPredicted RBP16.37■□□□□ 0.21
LIME1-205ENST00000480139 IL36RNQ9UBH0 155 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 GHRLQ9UBU3 117 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 SLC25A10Q9UBX3 287 aaPredicted RBP16.37■□□□□ 0.21
LIME1-205ENST00000480139 MRPS28Q9Y2Q9 187 aaKnown RBP16.37■□□□□ 0.21
LIME1-205ENST00000480139 INSIG2Q9Y5U4 225 aa16.37■□□□□ 0.21
LIME1-205ENST00000480139 ENSAO43768 121 aaKnown RBP16.36■□□□□ 0.21
LIME1-205ENST00000480139 CDRT1O95170 752 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 HAND1O96004 215 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 SMIM18P0DKX4 95 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 SELLP14151 372 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 CD36P16671 472 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 CEBPDP49716 269 aaPredicted RBP16.36■□□□□ 0.21
LIME1-205ENST00000480139 OR4D6Q8NGJ1 314 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 ST8SIA4Q92187 359 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 ELL3Q9HB65 397 aaPredicted RBP16.36■□□□□ 0.21
LIME1-205ENST00000480139 MMP26Q9NRE1 261 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 METRNQ9UJH8 293 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 SSR3Q9UNL2 185 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 ING4Q9UNL4 249 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 GSTK1Q9Y2Q3 226 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 ARHGAP32A7KAX9 2087 aa16.36■□□□□ 0.21
LIME1-205ENST00000480139 KIR2DS1A0A191URI9 304 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 C22orf46C9J442 243 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 ZNF737O75373 536 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 CSTBP04080 98 aaKnown RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 LIPFP07098 398 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 UBBP0CG47 229 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 MYL9P24844 172 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 LMO1P25800 156 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 PSMD7P51665 324 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 COL10A1Q03692 680 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 IL13RA2Q14627 380 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 CR1LQ2VPA4 569 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 AWAT2Q6E213 333 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 BTNL3Q6UXE8 466 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 BTN2A1Q7KYR7 527 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 TMEM185AQ8NFB2 350 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 C8orf46Q8TAG6 207 aa16.35■□□□□ 0.21
LIME1-205ENST00000480139 MRPS24Q96EL2 167 aaKnown RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 C1orf147Q96MC9 270 aaPredicted RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 NUDT16L1Q9BRJ7 211 aaKnown RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 EXOSC4Q9NPD3 245 aaKnown RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 TXNL4BQ9NX01 149 aaKnown RBP16.35■□□□□ 0.21
LIME1-205ENST00000480139 K7N7A8 449 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 PDCD5O14737 125 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 SH2D1BO14796 132 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 SLC22A1O15245 554 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 HTR3BO95264 441 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 TK1P04183 234 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 RANBP1P43487 201 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 TIMM50Q3ZCQ8 353 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 C22orf42Q6IC83 251 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 GLIPR1L1Q6UWM5 242 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 OSR2Q8N2R0 312 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 FGFRL1Q8N441 504 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 CHST4Q8NCG5 386 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 OR6M1Q8NGM8 313 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 OR10K1Q8NGX5 313 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 SNX22Q96L94 193 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 GFI1Q99684 422 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 DCTN5Q9BTE1 182 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 TMPRSS13Q9BYE2 586 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 MRPS26Q9BYN8 205 aaKnown RBP16.34■□□□□ 0.21
LIME1-205ENST00000480139 LPAR3Q9UBY5 353 aa16.34■□□□□ 0.21
LIME1-205ENST00000480139 RPUSD1Q9UJJ7 312 aaKnown RBP16.34■□□□□ 0.21
LIME1-205ENST00000480139 SONP18583 2426 aaKnown RBP16.34■□□□□ 0.21
LIME1-205ENST00000480139 TRBV23-1A0A0A0MS06 115 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 INAFM1C9JVW0 142 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 OR2H2O95918 312 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 CALCBP10092 127 aa16.33■□□□□ 0.2
LIME1-205ENST00000480139 GTF2F2P13984 249 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms