RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	TRDV1	A0A1B0GX56	115 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894		H3BSH0	61 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	GPR37	O15354	613 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	TSPAN9	O75954	239 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	FSTL3	O95633	263 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	GRP	P07492	148 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	HCK	P08631	526 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	RPS2	P15880	293 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	CFHR2	P36980	270 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	GPM6A	P51674	278 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	MTCP1	P56278	107 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	MAB21L1	Q13394	359 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	KCNJ8	Q15842	424 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	HSD17B12	Q53GQ0	312 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	CEP78	Q5JTW2	689 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	UNQ9370/PRO34162	Q6UXP9	181 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	LDLRAD3	Q86YD5	345 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	MKX	Q8IYA7	352 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	NKAIN3	Q8N8D7	197 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	PNLDC1	Q8NA58	520 aa	Known RBP	12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR10Z1	Q8NGY1	313 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR10AC1	Q8NH08	325 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	RGP1	Q92546	391 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	TMEM203	Q969S6	136 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	FOXRED1	Q96CU9	486 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	NEIL1	Q96FI4	390 aa	Predicted RBP	12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	WWC2-AS2	Q96NR7	200 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	PKIB	Q9C010	78 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	TLNRD1	Q9H1K6	362 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	RHOF	Q9HBH0	211 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	GCM1	Q9NP62	436 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	RNF7	Q9UBF6	113 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	STUB1	Q9UNE7	303 aa		12.83	□□□□□ -0.36
HDLBP-238	ENST00000479894	FAM230A	A0A1W2PPH8	454 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	PQLC2L	A1A4F0	135 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	TMEM178B	H3BS89	294 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894		J3QT63	122 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	AZGP1	P25311	298 aa	Known RBP	12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	BDKRB2	P30411	391 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	IER3	P46695	156 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	FGF12	P61328	243 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	UBE2V2	Q15819	145 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	ZNF529	Q6P280	563 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	CD200R1L	Q6Q8B3	271 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894		Q8IYB0	196 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR13C9	Q8NGT0	318 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR51I2	Q9H344	312 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	SNTG1	Q9NSN8	517 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	RASL12	Q9NYN1	266 aa		12.82	□□□□□ -0.36
HDLBP-238	ENST00000479894	hCG_1807616	A0A1W2PRN6	198 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894		A6NIN4	97 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	PDCD5	O14737	125 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	SC5D	O75845	299 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	ACAA1	P09110	424 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	UCHL1	P09936	223 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	CD36	P16671	472 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	SRM	P19623	302 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	MYL9	P24844	172 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	FGF9	P31371	208 aa	Predicted RBP	12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	BMX	P51813	675 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	HERPUD1	Q15011	391 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	C11orf87	Q6NUJ2	197 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894		Q6ZTK2	550 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	MOGAT3	Q86VF5	341 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	HPSE2	Q8WWQ2	592 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	GPER1	Q99527	375 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	S100A13	Q99584	98 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	TMEM165	Q9HC07	324 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	C1orf123	Q9NWV4	160 aa		12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	SF3B6	Q9Y3B4	125 aa	Known RBP	12.81	□□□□□ -0.36
HDLBP-238	ENST00000479894	GABRP	O00591	440 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	NDUFA2	O43678	99 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	IGHV4-59	P01825	116 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	RPL5	P46777	297 aa	Known RBP	12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	HAAO	P46952	286 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	RPS25	P62851	125 aa	Known RBP	12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	IL24	Q13007	206 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	SSX1	Q16384	188 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	OXLD1	Q5BKU9	147 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	GLT8D1	Q68CQ7	371 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	HAGHL	Q6PII5	290 aa	Predicted RBP	12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	NLRC3	Q7RTR2	1065 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	GPR141	Q7Z602	305 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	SAXO1	Q8IYX7	474 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	SCCPDH	Q8NBX0	429 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR8B3	Q8NGG8	313 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	OR8B2	Q96RD0	313 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	DPAGT1	Q9H3H5	408 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	EXOSC4	Q9NPD3	245 aa	Known RBP	12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	UFSP2	Q9NUQ7	469 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	TAS2R4	Q9NYW5	299 aa		12.8	□□□□□ -0.36
HDLBP-238	ENST00000479894	TRAV1-2	A0A0B4J238	106 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	TRAV38-1	A0A0B4J264	116 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	CENPVL3	A0A0U1RRI6	287 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	CDIPT	O14735	213 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	ENSA	O43768	121 aa	Known RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	ZNF780A	O75290	641 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	IGFBP3	P17936	291 aa	Predicted RBP	12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	MPZ	P25189	248 aa		12.79	□□□□□ -0.36
HDLBP-238	ENST00000479894	ZNF93	P35789	620 aa	Predicted RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms