RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 CCL3P10147 92 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 HTR1FP30939 366 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OPRM1P35372 400 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OR3A4PP47883 348 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 P2RY4P51582 365 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 PSMD4P55036 377 aaKnown RBP3.85□□□□□ -1.79
UPF3A-205ENST00000479712 ATP5IP56385 69 aaPredicted RBP3.85□□□□□ -1.79
UPF3A-205ENST00000479712 KCNJ2P63252 427 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 C2orf80Q0P641 193 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 PLCXD2Q0VAA5 305 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 NRF1Q16656 503 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 PGGHGQ32M88 737 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 VPS26BQ4G0F5 336 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TRMT12Q53H54 448 aaKnown RBP3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TIGD3Q6B0B8 471 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OR2A2Q6IF42 318 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 NANOGNBQ7Z5D8 188 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TGIF2LXQ8IUE1 241 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 NUDCD3Q8IVD9 361 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 UBE2J2Q8N2K1 259 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TMEM251Q8N6I4 163 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OR10G3Q8NGC4 313 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OR52R1Q8NGF1 315 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 OR1L4Q8NGR5 311 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 AKR7LQ8NHP1 331 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TWIST2Q8WVJ9 160 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 HGDQ93099 445 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 UCN3Q969E3 161 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 TPD52L3Q96J77 140 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 CLCC1Q96S66 551 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 HBEGFQ99075 208 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 DOHHQ9BU89 302 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 RNF126Q9BV68 326 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 REEP4Q9H6H4 257 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 METTL7AQ9H8H3 244 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 ISG20L2Q9H9L3 353 aaKnown RBP3.85□□□□□ -1.79
UPF3A-205ENST00000479712 PROK2Q9HC23 129 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 RPS10P5Q9NQ39 176 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 GIN1Q9NXP7 522 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 SLC17A7Q9P2U7 560 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 ABCG2Q9UNQ0 655 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 MOKQ9UQ07 419 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 DNAH10Q8IVF4 4471 aa3.85□□□□□ -1.79
UPF3A-205ENST00000479712 IGHV1OR15-1A0A075B7D0 117 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 IGLV3-32A0A0A0MS00 114 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 TRGV5A0A0B4J1U4 118 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 IGHV7-81A0A0B4J1V7 117 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 A0A0G2JMM0 328 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 A0A1W2PPB8 328 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 A0A1W2PRS3 328 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 KIR3DP1A8MWS1 328 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 UPK1AO00322 258 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SPAG7O75391 227 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CBR3O75828 277 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SERF1AO75920 110 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 LYPD3O95274 346 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 EPPINO95925 133 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 ACTL6AO96019 429 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CD8AP01732 235 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 GUSBP08236 651 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 KRT16P08779 473 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 PRB4P10163 310 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 PRPS1L1P21108 318 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 DNASE1L1P49184 302 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CDK9P50750 372 aaKnown RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 RPL14P50914 215 aaKnown RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 NCBP2P52298 156 aaKnown RBP eCLIP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CLDN8P56748 225 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 RPL38P63173 70 aaKnown RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 EMX2Q04743 252 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 ZNHIT3Q15649 155 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 ATP6AP1LQ52LC2 224 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 BEX5Q5H9J7 111 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 AP1ARQ63HQ0 302 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CLEC6AQ6EIG7 209 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SCIMPQ6UWF3 145 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 UTS2BQ765I0 119 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 RIMKLAQ8IXN7 391 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 CDRT4Q8N9R6 151 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 FAM83FQ8NEG4 500 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 OR7G2Q8NG99 324 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 OR9A2Q8NGT5 310 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 NEIL3Q8TAT5 605 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SFXN5Q8TD22 340 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 MAGEE2Q8TD90 523 aaPredicted RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 OR5P2Q8WZ92 322 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 EXOSC8Q96B26 276 aaKnown RBP3.84□□□□□ -1.79
UPF3A-205ENST00000479712 TMIGD2Q96BF3 282 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 PPCDCQ96CD2 204 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 TLCD1Q96CP7 247 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 RILPQ96NA2 401 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 RNF2Q99496 336 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 GAL3ST1Q99999 423 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 KLHDC3Q9BQ90 382 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 OSBPL11Q9BXB4 747 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 EBPLQ9BY08 206 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 FOLH1BQ9HBA9 442 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SDHAF3Q9NRP4 125 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 SLC7A10Q9NS82 523 aa3.84□□□□□ -1.79
UPF3A-205ENST00000479712 DDX18Q9NVP1 670 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms