RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 WNT2BQ93097 391 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 MSI2Q96DH6 328 aaKnown RBP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 KIRREL1Q96J84 757 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 GINS3Q9BRX5 216 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 GPR35Q9HC97 309 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 CXCL13O43927 109 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 FARS2O95363 451 aaKnown RBP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 CFIP05156 583 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 RBM11P57052 281 aaKnown RBP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 SRSF7Q16629 238 aaKnown RBP eCLIP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 CEACAM16Q2WEN9 425 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 Q6ZS49 121 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 UBALD2Q8IYN6 164 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 TMEM45BQ96B21 275 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 ALKBH3Q96Q83 286 aaPredicted RBP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 PRDM14Q9GZV8 571 aa21.32■■□□□ 1
SYNGAP1-206ENST00000479510 SAV1Q9H4B6 383 aaPredicted RBP21.32■■□□□ 1
SYNGAP1-206ENST00000479510 PRSS44E7EML9 344 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 SCGB1D2O95969 90 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 GLAP06280 429 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 DANCRP0C864 163 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 FUT3P21217 361 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 RAB13P51153 203 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 ZNF92Q03936 586 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 OR10D3Q8NH80 312 aa21.31■■□□□ 1
SYNGAP1-206ENST00000479510 B4E171 279 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 CYTIPO60759 359 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 TSPAN7P41732 249 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 RGS19P49795 217 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 HERV-K104P61576 105 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 PLCXD3Q63HM9 321 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 MARS2Q96GW9 593 aaKnown RBP21.3■■□□□ 1
SYNGAP1-206ENST00000479510 C1QTNF5Q9BXJ0 243 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 BIN3Q9NQY0 253 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 ZNF581Q9P0T4 197 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 LUZP4Q9P127 313 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 EYSQ5T1H1 3165 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 A0A0G2JMM0 328 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 A0A1W2PPB8 328 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 A0A1W2PRS3 328 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 LRRC3CA6NJW4 275 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 KIR3DP1A8MWS1 328 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 ST8SIA3O43173 380 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 F12P00748 615 aaPredicted RBP21.3■■□□□ 1
SYNGAP1-206ENST00000479510 CD80P33681 288 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 SP6Q3SY56 376 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 AVPI1Q5T686 147 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 LYZL2Q7Z4W2 148 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 DMBX1Q8NFW5 382 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 GLYATL2Q8WU03 294 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 ERGIC1Q969X5 290 aa21.3■■□□□ 1
SYNGAP1-206ENST00000479510 CPNE4Q96A23 557 aaPredicted RBP21.3■■□□□ 1
SYNGAP1-206ENST00000479510 STRAPQ9Y3F4 350 aaKnown RBP21.3■■□□□ 1
SYNGAP1-206ENST00000479510 LINC01387J3KSC0 135 aa21.29■■□□□ 1
SYNGAP1-206ENST00000479510 FXYD4P59646 89 aa21.29■■□□□ 1
SYNGAP1-206ENST00000479510 PPP1R32Q7Z5V6 425 aa21.29■■□□□ 1
SYNGAP1-206ENST00000479510 SMCO4Q9NRQ5 59 aa21.29■■□□□ 1
SYNGAP1-206ENST00000479510 CER1O95813 267 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 TSPAN15O95858 294 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 MMP7P09237 267 aaPredicted RBP21.28■■□□□ 1
SYNGAP1-206ENST00000479510 SPP1P10451 314 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 PEA15Q15121 130 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 TRIM61Q5EBN2 209 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 SMIM3Q9BZL3 60 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 FAM86C1Q9NVL1 165 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 PARPBPQ9NWS1 579 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 LAMA1P25391 3075 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 FOLR2P14207 255 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 COLCA1Q6ZS62 124 aa21.28■■□□□ 1
SYNGAP1-206ENST00000479510 SNIP1Q8TAD8 396 aaKnown RBP21.28■■□□□ 1
SYNGAP1-206ENST00000479510 CDS2O95674 445 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 OR8U9P0C7N5 309 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 PATE4P0C8F1 98 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 PRKACAP17612 351 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 PHLDA2Q53GA4 152 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 FBXW12Q6X9E4 464 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 SAXO1Q8IYX7 474 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 OR8U1Q8NH10 309 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 PIGCQ92535 297 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 RNF122Q9H9V4 155 aa21.27■■□□□ 1
SYNGAP1-206ENST00000479510 SNCAP37840 140 aa21.27■□□□□ 0.99
SYNGAP1-206ENST00000479510 CLDN15P56746 228 aa21.27■□□□□ 0.99
SYNGAP1-206ENST00000479510 ZNF442Q9H7R0 627 aa21.27■□□□□ 0.99
SYNGAP1-206ENST00000479510 CACFD1Q9UGQ2 172 aa21.27■□□□□ 0.99
SYNGAP1-206ENST00000479510 PQLC2LA1A4F0 135 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 TDGF1P13385 188 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 OR5L1Q8NGL2 311 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 OR4D5Q8NGN0 318 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 DYRK2Q92630 601 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 ABHD14BQ96IU4 210 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 LINC00470Q9BZP3 86 aa21.26■□□□□ 0.99
SYNGAP1-206ENST00000479510 IGKV3D-15A0A087WSY6 115 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 PPYP01298 95 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 EDN3P14138 238 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 AADACP22760 399 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 C15orf54Q8N8G6 183 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 FGFBP3Q8TAT2 258 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 C9JQL5 133 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 RPL36A-HNRNPH2H7BZ11 118 aa21.25■□□□□ 0.99
SYNGAP1-206ENST00000479510 AGPAT2O15120 278 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 246.1 ms