RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PAX2Q02962 417 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 FAM27D1Q5T7N8 215 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ATPAF1Q5TC12 328 aaPredicted RBP5.71□□□□□ -1.49
BRCA1-215ENST00000478531 CD276Q5ZPR3 534 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF529Q6P280 563 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 CRIP3Q6Q6R5 217 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ZNF367Q7RTV3 350 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 FAM58AQ8N1B3 248 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ARL6IP6Q8N6S5 226 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 PNLDC1Q8NA58 520 aaKnown RBP5.71□□□□□ -1.49
BRCA1-215ENST00000478531 OR10K1Q8NGX5 313 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 MGLLQ99685 303 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 PCGF1Q9BSM1 259 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 TMEM138Q9NPI0 162 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ACOT13Q9NPJ3 140 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 ONECUT1Q9UBC0 465 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 RABL2BQ9UNT1 228 aa5.71□□□□□ -1.49
BRCA1-215ENST00000478531 IGHV3OR16-10A0A075B7F0 116 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 TRBV5-7A0A0A0MS05 114 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 ALX3O95076 343 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 CDRT1O95170 752 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 HAND1O96004 215 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 KNG1P01042 644 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 CD1AP06126 327 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 HNRNPCP07910 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 IGFBP3P17936 291 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 FSTP19883 344 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 GABRR1P24046 479 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF93P35789 620 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 TGFBR2P37173 567 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 ZP1P60852 638 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 FGF12P61328 243 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 COL10A1Q03692 680 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 EMX1Q04741 257 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 SCN1BQ07699 218 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 MLLT11Q13015 90 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 RSU1Q15404 277 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 ACSM3Q53FZ2 586 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 FAM185AQ8N0U4 392 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 SVOPQ8N4V2 548 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF561Q8N587 486 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 JAGN1Q8N5M9 183 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 MS4A15Q8N5U1 240 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 SDSLQ96GA7 329 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 NR1H4Q96RI1 486 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 CHST6Q9GZX3 395 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 OPN4Q9UHM6 478 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 RPUSD1Q9UJJ7 312 aaKnown RBP5.71□□□□□ -1.5
BRCA1-215ENST00000478531 GSTK1Q9Y2Q3 226 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 MAB21L2Q9Y586 359 aa5.71□□□□□ -1.5
BRCA1-215ENST00000478531 TENM1Q9UKZ4 2725 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 TRAV40A0A0B4J280 105 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 KIR2DS1A0A191URI9 304 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 MEX3AA1L020 520 aaKnown RBP5.7□□□□□ -1.5
BRCA1-215ENST00000478531 SIRPB1O00241 398 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 PIN1P1O15428 100 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 KDM4BO94953 1096 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 ECDO95905 644 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-215ENST00000478531 PPIAL4GP0DN37 164 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 CPEP16870 476 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 SERPINA2P20848 420 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 PSMB9P28065 219 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 ARF6P62330 175 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 TPBGQ13641 420 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 EDDM3AQ14507 147 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 METTL11BQ5VVY1 283 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 C1QL2Q7Z5L3 287 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 CEACAM19Q7Z692 300 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 PHC2Q8IXK0 858 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 OR4M1Q8NGD0 313 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 NANPQ8TBE9 248 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 C22orf15Q8WYQ4 148 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 THRSPQ92748 146 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 DACT3Q96B18 629 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-215ENST00000478531 S100A13Q99584 98 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 DCTN5Q9BTE1 182 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 TCF7L1Q9HCS4 588 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 ING4Q9UNL4 249 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 STAB1Q9NY15 2570 aa5.7□□□□□ -1.5
BRCA1-215ENST00000478531 HSPB6O14558 160 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TOX4O94842 621 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 HTR3BO95264 441 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TK1P04183 234 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ALDOBP05062 364 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 CHRM2P08172 466 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 IGHV4-38-2P0DP08 117 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF44P15621 663 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 EPHA1P21709 976 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PTGFRP43088 359 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 CAV3P56539 151 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 EDDM3BP56851 147 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PRB3Q04118 309 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PAX8Q06710 450 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GPR50Q13585 617 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PDCD1Q15116 288 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PIGYQ3MUY2 71 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 HSD17B12Q53GQ0 312 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SPIN3Q5JUX0 258 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 AWAT2Q6E213 333 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF773Q6PK81 442 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 148.8 ms