RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 ACTA2P62736 377 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 ACTG2P63267 376 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 PDZK1IP1Q13113 114 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 ZNF146Q15072 292 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 CCDC121Q6ZUS5 278 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 LHFPL2Q6ZUX7 228 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 Q96MT0 163 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 ZNF714Q96N38 554 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 NEK6Q9HC98 313 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 GMPPBQ9Y5P6 360 aa11.16□□□□□ -0.62
RCC1-211ENST00000478232 TRBV2A0A0J9YWF9 115 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 OR4C45A6NMZ5 311 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 SH2D1BO14796 132 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 MGST3O14880 152 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 MT-ND2P03891 347 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 ARG1P05089 322 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 BCL3P20749 454 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 GABRR1P24046 479 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 PAX6P26367 422 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 ERP29P30040 261 aaKnown RBP11.15□□□□□ -0.62
RCC1-211ENST00000478232 POU3F4P49335 361 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 EFNB2P52799 333 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 ZNF91Q05481 1191 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 GALEQ14376 348 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 GRK1Q15835 563 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 SPIN3Q5JUX0 258 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 ZNF626Q68DY1 528 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 Q6ZTK2 550 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 LHFPL4Q7Z7J7 247 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 OR2T6Q8NHC8 308 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 FOXRED1Q96CU9 486 aaPredicted RBP11.15□□□□□ -0.62
RCC1-211ENST00000478232 LGALS12Q96DT0 336 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 PELI1Q96FA3 418 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 NPFFR1Q9GZQ6 430 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 RHOFQ9HBH0 211 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 HMG20AQ9NP66 347 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 RBFOX1Q9NWB1 397 aaKnown RBP11.15□□□□□ -0.62
RCC1-211ENST00000478232 LINC00312Q9Y6C7 94 aa11.15□□□□□ -0.62
RCC1-211ENST00000478232 VWFP04275 2813 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 RRP9O43818 475 aaKnown RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 PSPNO60542 156 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 ALX3O95076 343 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 FADS2O95864 444 aaKnown RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 IGHA1P01876 353 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 PRKACAP17612 351 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 GABRB1P18505 474 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 DUSP1P28562 367 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 MRPL28Q13084 256 aaKnown RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 DYNC1I2Q13409 638 aaKnown RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 ALKBH1Q13686 389 aaKnown RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 EDDM3AQ14507 147 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 HERPUD1Q15011 391 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 SSX2Q16385 188 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 C2orf68Q2NKX9 166 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
RCC1-211ENST00000478232 LHFPL3Q86UP9 236 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 SAXO1Q8IYX7 474 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 SYS1Q8N2H4 156 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 ZNF676Q8N7Q3 588 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 OR13C3Q8NGS6 347 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 C4orf36Q96KX1 117 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 OPALINQ96PE5 141 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 C9orf16Q9BUW7 83 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 ABCB10Q9NRK6 738 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 AASSQ9UDR5 926 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 PITPNC1Q9UKF7 332 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 PCDHGB5Q9Y5G0 923 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 TRRAPQ9Y4A5 3859 aa11.14□□□□□ -0.63
RCC1-211ENST00000478232 MEX3AA1L020 520 aaKnown RBP11.13□□□□□ -0.63
RCC1-211ENST00000478232 FUOMA2VDF0 154 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 DBTP11182 482 aaKnown RBP11.13□□□□□ -0.63
RCC1-211ENST00000478232 LMO1P25800 156 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 RAB13P51153 203 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 DYNLT3P51808 116 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 FAM189A2Q15884 450 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 MINOS1Q5TGZ0 78 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 ZBTB49Q6ZSB9 765 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 SERPINA12Q8IW75 414 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 DYNAPQ8N1N2 210 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 OR4S1Q8NGB4 309 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 OR5D14Q8NGL3 314 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 OR10AC1Q8NH08 325 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 RPS4Y2Q8TD47 263 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 ALG8Q9BVK2 526 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 CHST6Q9GZX3 395 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 INPP5EQ9NRR6 644 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 IL36RNQ9UBH0 155 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 MYRFQ9Y2G1 1151 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 UBE2J1Q9Y385 318 aaPredicted RBP11.13□□□□□ -0.63
RCC1-211ENST00000478232 SESN1Q9Y6P5 492 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 MINOS1-NBL1R4GNA1 71 aa11.13□□□□□ -0.63
RCC1-211ENST00000478232 WNK1Q9H4A3 2382 aa11.12□□□□□ -0.63
RCC1-211ENST00000478232 IGKV1-12A0A0C4DH73 117 aa11.12□□□□□ -0.63
RCC1-211ENST00000478232 LOC100130705A0A1B0GUX0 176 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms