RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 GUSBP1Q15486 140 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 OR1C1Q15619 314 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 TWIST1Q15672 202 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 LTC4SQ16873 150 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 C2orf68Q2NKX9 166 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 HLA-DRB5Q30154 266 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 PLK5Q496M5 336 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CYBRD1Q53TN4 286 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 NCMAPQ5T1S8 102 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 SFXN4Q6P4A7 337 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 TBPL2Q6SJ96 375 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 BPIFB2Q8N4F0 458 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CBR4Q8N4T8 237 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 NRACQ8N912 160 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 OR52L1Q8NGH7 329 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 OR13C8Q8NGS7 320 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 OR4F5Q8NH21 305 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 SLC38A5Q8WUX1 472 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 S100ZQ8WXG8 99 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 MRPS31Q92665 395 aaKnown RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 TMEM159Q96B96 161 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CCDC126Q96EE4 140 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 SCMH1Q96GD3 660 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 REEP6Q96HR9 211 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 ST6GAL2Q96JF0 529 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 HSFY1Q96LI6 401 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CNBD2Q96M20 576 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 AGMATQ9BSE5 352 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 C1orf50Q9BV19 199 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 RSPO3Q9BXY4 272 aaPredicted RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 SLC17A9Q9BYT1 436 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CHIAQ9BZP6 476 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 MAP1LC3BQ9GZQ8 125 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 FNDC4Q9H6D8 234 aaPredicted RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 FGF20Q9NP95 211 aaPredicted RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 GPR84Q9NQS5 396 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 PLSCR3Q9NRY6 295 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 DMAC2Q9NW81 257 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 TAS2R16Q9NYV7 291 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 TECRQ9NZ01 308 aaKnown RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 IDI2-AS1Q9NZ38 188 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 MRPL27Q9P0M9 148 aaKnown RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 OR1A1Q9P1Q5 309 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 HSPB8Q9UJY1 196 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 PILRBQ9UKJ0 227 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 ERG28Q9UKR5 140 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 FZR1Q9UM11 496 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 LAMP3Q9UQV4 416 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 C14orf166Q9Y224 244 aaKnown RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 WDR83OSQ9Y284 106 aa2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 CARHSP1Q9Y2V2 147 aaKnown RBP2.96□□□□□ -1.94
FNDC3B-209ENST00000478016 NFASCO94856 1347 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 MYH11P35749 1972 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TRAV38-1A0A0B4J264 116 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 A0A0G2JK05 382 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 A0A1W2PPI3 338 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TMEM189A5PLL7 270 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TMEM202A6NGA9 273 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 OR4C46A6NHA9 309 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 C15orf61A6NNL5 157 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 A8MVM7 634 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 G3V2L1 256 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 RPL36A-HNRNPH2H7BZ11 118 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 J3QR06 171 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 ZNF593O00488 134 aaPredicted RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 ZNF195O14628 629 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 RBFOX2O43251 390 aaKnown RBP eCLIP2.95□□□□□ -1.945e-9■■■□□ 17.5
FNDC3B-209ENST00000478016 SNX3O60493 162 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 SNAPC5O75971 98 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TBX6O95947 436 aaPredicted RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 NRASP01111 189 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 AMBPP02760 352 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 OPN1SWP03999 348 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 CATP04040 527 aaKnown RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 DBIP07108 87 aaKnown RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 SP1P08047 785 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 ESDP10768 282 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 MGMTP16455 207 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 GJB2P29033 226 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 IL12AP29459 219 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 SRIP30626 198 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 CHRNB4P30926 498 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 BRS3P32247 399 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 HRH1P35367 487 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TSFMP43897 325 aaKnown RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 GZMMP51124 257 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 OSTNP61366 133 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 SNRPD1P62314 119 aaKnown RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 UNC119Q13432 240 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 EBPQ15125 230 aaKnown RBP2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 IZUMO4Q1ZYL8 232 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 ZNF181Q2M3W8 571 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 SLC25A35Q3KQZ1 300 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 TP53I3Q53FA7 332 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 CARD16Q5EG05 197 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 PIK3CD-AS1Q5SR53 167 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 COL5A1-AS1Q5SY13 56 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 RTL6Q6ICC9 239 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 ANKRD54Q6NXT1 300 aa2.95□□□□□ -1.94
FNDC3B-209ENST00000478016 PRSS54Q6PEW0 395 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms