RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 ZNF75AQ96N20 296 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 OR2M4Q96R27 311 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 CHID1Q9BWS9 393 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 SHCBP1LQ9BZQ2 653 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 FBXO44Q9H4M3 255 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 ZNF706Q9Y5V0 76 aaPredicted RBP1.42□□□□□ -2.18
TARDBP-208ENST00000477447 BRD4O60885 1362 aaPredicted RBP1.42□□□□□ -2.18
TARDBP-208ENST00000477447 PLXNB1O43157 2135 aa1.42□□□□□ -2.18
TARDBP-208ENST00000477447 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 LOC389332A0A1B0GUA5 103 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 A0A1W2PPV4 95 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 GMNCA6NCL1 334 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ZNF729A6NN14 1252 aaPredicted RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 K7EPK0 472 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 K7ERS5 55 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ISLRO14498 428 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 POLR3GO15318 223 aaPredicted RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 SPOPO43791 374 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 SLC37A4O43826 429 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 RLN2P04090 185 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 PTHLHP12272 177 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 HTR2BP41595 481 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ETV1P50549 477 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 HADHBP55084 474 aaKnown RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 SSX1Q16384 188 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 TAL2Q16559 108 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ZNF404Q494X3 552 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 TTMPQ5BVD1 217 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 SYT6Q5T7P8 510 aaPredicted RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 AADACL4Q5VUY2 407 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 CLEC18BQ6UXF7 455 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ASCL4Q6XD76 172 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 LINC00596Q86U02 117 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 NELFCDQ8IXH7 590 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 AMN1Q8IY45 258 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 CPNE9Q8IYJ1 553 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 PDCL2Q8N4E4 241 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ZNF321PQ8N8H1 164 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 PHOSPHO2Q8TCD6 241 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 QKIQ96PU8 341 aaKnown RBP eCLIP1.41□□□□□ -2.183e-6■□□□□ 9.1
TARDBP-208ENST00000477447 BCL7BQ9BQE9 202 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 BEX2Q9BXY8 128 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 TXNIPQ9H3M7 391 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 SDHAF3Q9NRP4 125 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 NLE1Q9NVX2 485 aaPredicted RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 ZNHIT6Q9NWK9 470 aaKnown RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 AP3M1Q9Y2T2 418 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 BAZ1BQ9UIG0 1483 aaKnown RBP1.41□□□□□ -2.18
TARDBP-208ENST00000477447 NEURL4Q96JN8 1562 aa1.41□□□□□ -2.18
TARDBP-208ENST00000477447 MAP3K19Q56UN5 1328 aa1.4□□□□□ -2.18
TARDBP-208ENST00000477447 ZSWIM8A7E2V4 1837 aa1.4□□□□□ -2.18
TARDBP-208ENST00000477447 NLRC5Q86WI3 1866 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 IGHV3-21A0A0B4J1V1 117 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 TVP23AA6NH52 213 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 LEUTXA8MZ59 168 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 GGTLC3B5MD39 225 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 F8VZ95 297 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 C3orf84H3BNL1 204 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 NPPAP01160 153 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 CCDC172P0C7W6 258 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 LIPCP11150 499 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 MLNP12872 115 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 ARR3P36575 388 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 DYNC1I2Q13409 638 aaKnown RBP1.4□□□□□ -2.19
TARDBP-208ENST00000477447 ATP6AP1LQ52LC2 224 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 CLLU1OSQ5K130 101 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 UGT2A3Q6UWM9 527 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 SPATA24Q86W54 205 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 ZFP82Q8N141 532 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 CA13Q8N1Q1 262 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 OR8A1Q8NGG7 326 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 TOP1MTQ969P6 601 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 RILPQ96NA2 401 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 YPEL4Q96NS1 127 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 C12orf4Q9NQ89 552 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 ANXA10Q9UJ72 324 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 FLVCR2Q9UPI3 526 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 V9GYY5 206 aaPredicted RBP1.4□□□□□ -2.19
TARDBP-208ENST00000477447 V9GYY9 64 aa1.4□□□□□ -2.19
TARDBP-208ENST00000477447 TNIKQ9UKE5 1360 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 A0A0B4J2C4 111 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 ANKRD20A5PA0PJZ0 165 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 MYBPHLA2RUH7 354 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 OR2AT4A6NND4 320 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 K7EN84 100 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 ZNF593O00488 134 aaPredicted RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 GATCO43716 136 aaKnown RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 KDELR3O43731 214 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 COX7A2P2O60397 106 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 GMDSO60547 372 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 SNAI1O95863 264 aaPredicted RBP1.39□□□□□ -2.19
TARDBP-208ENST00000477447 TAC1P20366 129 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 IMPA1P29218 277 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 P2RY2P41231 377 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 GPR4P46093 362 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 TPBGQ13641 420 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 STK38Q15208 465 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 SYCP1Q15431 976 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 UBE2NLQ5JXB2 153 aa1.39□□□□□ -2.19
TARDBP-208ENST00000477447 COMTD1Q86VU5 262 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms