RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 TMPRSS2O15393 492 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 GABRA1P14867 456 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 OR3A1P47881 315 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 DUSP21Q9H596 190 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 PCOLCE2Q9UKZ9 415 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 HIST1H1DP16402 221 aaKnown RBP16.5■□□□□ 0.23
VARS2-209ENST00000477288 TMEM241Q24JQ0 296 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 AMER3Q8N944 861 aa16.5■□□□□ 0.23
VARS2-209ENST00000477288 PCDHGA9Q9Y5G4 932 aaKnown RBP16.5■□□□□ 0.23
VARS2-209ENST00000477288 RPL30P62888 115 aaKnown RBP16.49■□□□□ 0.23
VARS2-209ENST00000477288 GLDNQ6ZMI3 551 aaPredicted RBP16.49■□□□□ 0.23
VARS2-209ENST00000477288 CD1BP29016 333 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 G6PCP35575 357 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 RAE1P78406 368 aaKnown RBP16.49■□□□□ 0.23
VARS2-209ENST00000477288 NHLRC1Q6VVB1 395 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 AMDHD2Q9Y303 409 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 LY86O95711 162 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 PRSS1P07477 247 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 SLC25A1P53007 311 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 SLC35E4Q6ICL7 350 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 YBX1P67809 324 aaKnown RBP16.49■□□□□ 0.23
VARS2-209ENST00000477288 OR2W3Q7Z3T1 314 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 TMED3Q9Y3Q3 217 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 C5orf17Q8NAS9 161 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 SIGLEC7Q9Y286 467 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 CBY1Q9Y3M2 126 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 U3KQ87 197 aa16.49■□□□□ 0.23
VARS2-209ENST00000477288 CISD3P0C7P0 127 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 SLC25A30Q5SVS4 291 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 SIPA1L3O60292 1781 aaPredicted RBP16.48■□□□□ 0.23
VARS2-209ENST00000477288 TRAV38-1A0A0B4J264 116 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 LANCL1O43813 399 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 ZNF205O95201 554 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 OR10D4PQ8NGN7 298 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 RAB40CQ96S21 281 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
VARS2-209ENST00000477288 AGFG2O95081 481 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 MGPP08493 103 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 NKG7Q16617 165 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 NUFIP2Q7Z417 695 aaKnown RBP16.48■□□□□ 0.23
VARS2-209ENST00000477288 WFDC3Q8IUB2 231 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 PGA3P0DJD8 388 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 CD96P40200 585 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 OR10G4Q8NGN3 311 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 OR10G9Q8NGN4 311 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 OR10G7Q8NGN6 311 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 OR5R1Q8NH85 324 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 WSB1Q9Y6I7 421 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 BRS3P32247 399 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 SULT1A1P50225 295 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 LINC01555Q8NAE3 123 aa16.48■□□□□ 0.23
VARS2-209ENST00000477288 CST4P01036 141 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 TIPARPQ7Z3E1 657 aaKnown RBP16.47■□□□□ 0.23
VARS2-209ENST00000477288 RASL11BQ9BPW5 248 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 SFT2D2O95562 160 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 IQCJQ1A5X6 159 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 FAM78BQ5VT40 261 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 MRGPRX3Q96LB0 322 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 MMP24Q9Y5R2 645 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 MAGEA5P43359 124 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 GSX1Q9H4S2 264 aaPredicted RBP16.47■□□□□ 0.23
VARS2-209ENST00000477288 STRCQ7RTU9 1775 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 ACAA2P42765 397 aaKnown RBP16.47■□□□□ 0.23
VARS2-209ENST00000477288 OR1L1Q8NH94 360 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 ASB13Q8WXK3 278 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 SLC7A10Q9NS82 523 aa16.47■□□□□ 0.23
VARS2-209ENST00000477288 SPAARA0A1B0GVQ0 90 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 HOXA4Q00056 320 aaPredicted RBP16.46■□□□□ 0.23
VARS2-209ENST00000477288 INSL4Q14641 139 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 PDPNQ86YL7 162 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 NTNG2Q96CW9 530 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 ATP5SQ99766 215 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 TCFL5Q9UL49 500 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 A0A1B0GTH9 108 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 SBK3P0C264 359 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 FOXO1Q12778 655 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 FAM219BQ5XKK7 198 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 ZDHHC22Q8N966 263 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 IL22RA2Q969J5 263 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 C19orf43Q9BQ61 176 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 CRISPLD2Q9H0B8 497 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 OR6C3Q9NZP0 311 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 AUP1Q9Y679 476 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 RP1L1Q8IWN7 2480 aaPredicted RBP16.46■□□□□ 0.23
VARS2-209ENST00000477288 TUBAL3A6NHL2 446 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 OR5AC1P0C628 307 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 BCL3P20749 454 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 PPP1R1AQ13522 171 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 PMS2P11Q13670 270 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 SRD5A3Q9H8P0 318 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 HOXB3P14651 431 aaPredicted RBP16.46■□□□□ 0.23
VARS2-209ENST00000477288 UBE2L3P68036 154 aaKnown RBP16.46■□□□□ 0.23
VARS2-209ENST00000477288 LINC00299Q6ZSB3 139 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 SH2D2AQ9NP31 389 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 MMP26Q9NRE1 261 aa16.46■□□□□ 0.23
VARS2-209ENST00000477288 PLPP3O14495 311 aa16.46■□□□□ 0.22
VARS2-209ENST00000477288 PPOXP50336 477 aa16.46■□□□□ 0.22
VARS2-209ENST00000477288 RAB32Q13637 225 aa16.46■□□□□ 0.22
VARS2-209ENST00000477288 DUSP18Q8NEJ0 188 aa16.46■□□□□ 0.22
VARS2-209ENST00000477288 ERVS71-1P61550 626 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 848 ms