RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 RAB25P57735 213 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 SORDQ00796 357 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 ARFRP1Q13795 201 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 WDR82Q6UXN9 313 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 SPERTQ8NA61 448 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 MAFIPQ8WZ33 124 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 ZNF442Q9H7R0 627 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 UFSP2Q9NUQ7 469 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 NDRG3Q9UGV2 375 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 ZNF107Q9UII5 783 aaPredicted RBP12.23□□□□□ -0.45
COL4A6-206ENST00000477085 FLVCR2Q9UPI3 526 aa12.23□□□□□ -0.45
COL4A6-206ENST00000477085 UBE2QL1A1L167 161 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 NAP1L6A6NFF2 107 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 WNT9BO14905 357 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 CA11O75493 328 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 ACAA1P09110 424 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 FUT3P21217 361 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 LOXP28300 417 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 PMELP40967 661 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 CD200P41217 278 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 TAS2R19P59542 299 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 GMFBP60983 142 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 Q6P435 159 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 LILRB1Q8NHL6 650 aaPredicted RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 NEURL2Q9BR09 285 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 ESRP2Q9H6T0 727 aaKnown RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 HES4Q9HCC6 221 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 NGBQ9NPG2 151 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 NKIRAS2Q9NYR9 191 aa12.22□□□□□ -0.45
COL4A6-206ENST00000477085 RCC2Q9P258 522 aaKnown RBP12.22□□□□□ -0.45
COL4A6-206ENST00000477085 TRAV6A0A075B6T7 132 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM221AA4D161 298 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A10PA6NDY2 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A18PA6NE21 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A16PA6NEW6 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A20PA6NIJ5 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A8PA6NJQ4 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A7PA6NKC0 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A22PA8MWA6 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A12PA8MX19 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A5PA8MXJ8 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A23PA8MXZ1 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 ZNF736B4DX44 427 aaPredicted RBP12.21□□□□□ -0.45
COL4A6-206ENST00000477085 RAB3DO95716 219 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 IGHV1-46P01743 117 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A15PP0C7V4 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A13PP0C7W8 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A14PP0C7W9 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 FAM90A24PP0C7X0 464 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 HOGA1Q86XE5 327 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 POC1AQ8NBT0 407 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 OR51S1Q8NGJ8 323 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 CREB3L1Q96BA8 519 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 ELMOD3Q96FG2 381 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 SLC6A7Q99884 636 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 ST6GALNAC5Q9BVH7 336 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 NUDT15Q9NV35 164 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.45
COL4A6-206ENST00000477085 HIVEP3Q5T1R4 2406 aa12.21□□□□□ -0.46
COL4A6-206ENST00000477085 TRAV24A0A0B4J272 114 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 TUBAL3A6NHL2 446 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 DEFB108AA8MXU0 73 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 INMT-MINDY4F8WBC2 141 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 BOLA2-SMG1P6H3BVE0 249 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 HRH1P35367 487 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF81P51508 661 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 MPV17LQ2QL34 196 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 RSBN1Q5VWQ0 802 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-206ENST00000477085 BTN2A1Q7KYR7 527 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 BPIFB2Q8N4F0 458 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 DEDD2Q8WXF8 326 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 MEGF10Q96KG7 1140 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 OR2V2Q96R30 315 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 RHOFQ9HBH0 211 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 IFT46Q9NQC8 304 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 C1orf123Q9NWV4 160 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ZFYVE26Q68DK2 2539 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 PLSCR5A0PG75 271 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 A6NLC8 198 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 PRSS44E7EML9 344 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 PMP2P02689 132 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 CD300CQ08708 224 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 IKZF1Q13422 519 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ARL6IP1Q15041 203 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 NKPD1Q17RQ9 610 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 MICBQ29980 383 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 MST1LQ2TV78 715 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF782Q6ZMW2 699 aaPredicted RBP12.2□□□□□ -0.46
COL4A6-206ENST00000477085 ZCCHC24Q8N2G6 241 aaKnown RBP12.2□□□□□ -0.46
COL4A6-206ENST00000477085 MRGPRFQ96AM1 343 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 PLK3Q9H4B4 646 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 NUBP2Q9Y5Y2 271 aa12.2□□□□□ -0.46
COL4A6-206ENST00000477085 HSPB6O14558 160 aa12.19□□□□□ -0.46
COL4A6-206ENST00000477085 HS3ST1O14792 307 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms