RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 LHFPL4Q7Z7J7 247 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 FAM58AQ8N1B3 248 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 DYNAPQ8N1N2 210 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 SYS1Q8N2H4 156 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 OR11H6Q8NGC7 330 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 OR51A4Q8NGJ6 313 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 OR13D1Q8NGV5 346 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 OR10AC1Q8NH08 325 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 EMG1Q92979 244 aaKnown RBP8.75□□□□□ -1.01
SEC13-214ENST00000476597 SPSB1Q96BD6 273 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 MALSU1Q96EH3 234 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 PELI1Q96FA3 418 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 ZNF649Q9BS31 505 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 C9orf16Q9BUW7 83 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 S100A14Q9HCY8 104 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 RAB18Q9NP72 206 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 RBFOX1Q9NWB1 397 aaKnown RBP8.75□□□□□ -1.01
SEC13-214ENST00000476597 HHLA2Q9UM44 414 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 MYRFQ9Y2G1 1151 aa8.75□□□□□ -1.01
SEC13-214ENST00000476597 IGKV1-12A0A0C4DH73 117 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 hADV38S2A0JD32 116 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MEX3AA1L020 520 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 ODF3BA8MYP8 253 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MPZL2O60487 215 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 PSPNO60542 156 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 IGKV1D-12P01611 117 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 IGHA1P01876 353 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ZNF20P17024 532 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 DUSP1P28562 367 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ERP29P30040 261 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 GABRA5P31644 462 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 POU3F4P49335 361 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 EFNB2P52799 333 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ACTA2P62736 377 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ACTG2P63267 376 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 GRK1Q15835 563 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 LDLRAD2Q5SZI1 272 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ZNF626Q68DY1 528 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ZBTB49Q6ZSB9 765 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 RNF144BQ7Z419 303 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 LHFPL3Q86UP9 236 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ZNF676Q8N7Q3 588 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MRPL48Q96GC5 212 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 C4orf36Q96KX1 117 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 Q96MT0 163 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 OPALINQ96PE5 141 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MYCBPQ99417 103 aaPredicted RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 ALG8Q9BVK2 526 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 CDCA4Q9BXL8 241 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MMP27Q9H306 513 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 ISG20L2Q9H9L3 353 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 HMG20AQ9NP66 347 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 AMBNQ9NP70 447 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 MRPS18AQ9NVS2 196 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 FAM118AQ9NWS6 357 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 SIGLEC9Q9Y336 463 aa8.74□□□□□ -1.01
SEC13-214ENST00000476597 TBL2Q9Y4P3 447 aaKnown RBP8.74□□□□□ -1.01
SEC13-214ENST00000476597 LOC100130705A0A1B0GUX0 176 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 MGST3O14880 152 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 KDM4BO94953 1096 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 ALX3O95076 343 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 FADS2O95864 444 aaKnown RBP8.73□□□□□ -1.01
SEC13-214ENST00000476597 ARG1P05089 322 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 RPSAP08865 295 aaKnown RBP8.73□□□□□ -1.01
SEC13-214ENST00000476597 CALCBP10092 127 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 DBTP11182 482 aaKnown RBP8.73□□□□□ -1.01
SEC13-214ENST00000476597 PRKACAP17612 351 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 GABRR1P24046 479 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 RAB13P51153 203 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 DEFA6Q01524 100 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 RAB40BQ12829 278 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 EDDM3AQ14507 147 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 SPIN3Q5JUX0 258 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 C11orf88Q6PI97 169 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 LIAT1Q6ZQX7 453 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 TPRX1Q8N7U7 411 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 OR4S1Q8NGB4 309 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 OR13C3Q8NGS6 347 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 OR13C9Q8NGT0 318 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 ZNF714Q96N38 554 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 CHST6Q9GZX3 395 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 ZCCHC4Q9H5U6 513 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 RANBP3Q9H6Z4 567 aaPredicted RBP8.73□□□□□ -1.01
SEC13-214ENST00000476597 RHOFQ9HBH0 211 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 INPP5EQ9NRR6 644 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 ERVK13-1Q9NX77 482 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 GLS2Q9UI32 602 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 LINC00312Q9Y6C7 94 aa8.73□□□□□ -1.01
SEC13-214ENST00000476597 PRKDCP78527 4128 aaKnown RBP8.72□□□□□ -1.01
SEC13-214ENST00000476597 E9PI62 339 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 SH2D1BO14796 132 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 CHST1O43916 411 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 ZFPL1O95159 310 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 OCM2P0CE71 109 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 OCMP0CE72 109 aaPredicted RBP8.72□□□□□ -1.01
SEC13-214ENST00000476597 LMO1P25800 156 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 OR3A1P47881 315 aa8.72□□□□□ -1.01
SEC13-214ENST00000476597 SNU13P55769 128 aaKnown RBP8.72□□□□□ -1.01
SEC13-214ENST00000476597 P2RX3P56373 397 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms