RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 RTL10Q7L3V2 364 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 THRSPQ92748 146 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ERGIC1Q969X5 290 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 SYT3Q9BQG1 590 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TMPRSS5Q9H3S3 457 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OBP2BQ9NPH6 170 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TUBG2Q9NRH3 451 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TRAPPC2LQ9UL33 140 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 USP9XQ93008 2570 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 SNRPGP15A8MWD9 76 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 AQP7O14520 342 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PHOX2AO14813 284 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 APOC1P02654 83 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PPP1CCP36873 323 aaKnown RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 EIF2S3P41091 472 aaKnown RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PTGFRP43088 359 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CLDN15P56746 228 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TCTAP57738 103 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PRB3Q04118 309 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF141Q15928 474 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 HFEQ30201 348 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 WDR25Q64LD2 544 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 NAXDQ8IW45 347 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF721Q8TF20 911 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 LRFN5Q96NI6 719 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 METTL9Q9H1A3 318 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 UQCC1Q9NVA1 299 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ERRFI1Q9UJM3 462 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ACANP16112 2415 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PPQ1 181 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CDX4O14627 284 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ADAM20O43506 726 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR2C1O95371 312 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 BGLAPP02818 100 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CD37P11049 281 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 FABP4P15090 132 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 EPHA8P29322 1005 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 NKX6-1P78426 367 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 DHODHQ02127 395 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 RIPPLY1Q0D2K3 151 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF154Q13106 437 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM128Q5BJH2 165 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 SLC25A30Q5SVS4 291 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 RPUSD3Q6P087 351 aaKnown RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR10AD1Q8NGE0 317 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR56B2PQ8NGI1 322 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR52M1Q8NGK5 317 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 OR5C1Q8NGR4 320 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 GPX8Q8TED1 209 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 CLDN23Q96B33 292 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TM4SF19Q96DZ7 209 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 KIRREL1Q96J84 757 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 PIGMQ9H3S5 423 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF71Q9NQZ8 489 aaPredicted RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 MED9Q9NWA0 146 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 NOSIPQ9Y314 301 aaKnown RBP4.37□□□□□ -1.71
CCDC39-204ENST00000476379 TNCP24821 2201 aa4.37□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PPE3 182 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 OR2M5A3KFT3 312 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MFSD2BA6NFX1 497 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FRG2CA6NGY1 282 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF705FA8MVS1 300 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TNFRSF10CO14798 259 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 AQP8O94778 261 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LYPD3O95274 346 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 LDOC1O95751 146 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NRASP01111 189 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 HPNP05981 417 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF705DP0CH99 300 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF705BP0CI00 300 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NPBWR2P48146 333 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 EFNA3P52797 238 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 EDDM3BP56851 147 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PLP2Q04941 152 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FUT7Q11130 342 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 IL10RAQ13651 578 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF528Q3MIS6 628 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SLC43A2Q8N370 569 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 FAM181AQ8N9Y4 354 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CCDC54Q8NEL0 328 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM37Q8WXS4 190 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PSMF1Q92530 271 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 CTHRC1Q96CG8 243 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SCGB3A2Q96PL1 93 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 RASL10BQ96S79 203 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NAA11Q9BSU3 229 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 PBDC1Q9BVG4 233 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 NMNAT2Q9BZQ4 307 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 C1orf123Q9NWV4 160 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 MYOTQ9UBF9 498 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 GHRLQ9UBU3 117 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 C19orf25Q9UFG5 118 aaPredicted RBP4.36□□□□□ -1.71
CCDC39-204ENST00000476379 SELENOKQ9Y6D0 94 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF98A6NK75 572 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 BPNT1O95861 308 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 IFNA5P01569 189 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 TK1P04183 234 aa4.36□□□□□ -1.71
CCDC39-204ENST00000476379 HSPB1P04792 205 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms