RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 SOX21Q9Y651 276 aaPredicted RBP5.97□□□□□ -1.45
LSAMP-203ENST00000474851 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.97□□□□□ -1.45
LSAMP-203ENST00000474851 ANK2Q01484 3957 aa5.96□□□□□ -1.45
LSAMP-203ENST00000474851 TRAV38-1A0A0B4J264 116 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 A0A1B0GTI1 187 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OOEPA6NGQ2 149 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF850A8MQ14 1090 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF670-ZNF695F2Z2N8 137 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 CDIPTO14735 213 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 PHYHO14832 338 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 IFNA7P01567 189 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 IL1AP01583 271 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 GYPAP02724 150 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 HTR1FP30939 366 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 MAP2K3P46734 347 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 HILS1P60008 231 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 GNB2P62879 340 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 RELBQ01201 579 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 DHODHQ02127 395 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF91Q05481 1191 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 MFGE8Q08431 387 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 MZT1Q08AG7 82 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 PRDX4Q13162 271 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 SSX1Q16384 188 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 HSD17B12Q53GQ0 312 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 SLC25A30Q5SVS4 291 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 LCN1P1Q5VSP4 162 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 Q6ZSR3 168 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 AHSA2Q719I0 299 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 SSX6Q7RTT6 188 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 KRT77Q7Z794 578 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 SLC35F2Q8IXU6 374 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 BCL6BQ8N143 479 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZDHHC22Q8N966 263 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 BOLLQ8N9W6 283 aaKnown RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR8H1Q8NGG4 311 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR8B3Q8NGG8 313 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR8J1Q8NGP2 316 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR8S1Q8NH09 359 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR51E1Q8TCB6 317 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 LRRC29Q8WV35 223 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 HPSE2Q8WWQ2 592 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 C22orf15Q8WYQ4 148 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 CREB3L1Q96BA8 519 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF48Q96MX3 618 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 OR8B2Q96RD0 313 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 CNN2Q99439 309 aaKnown RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 MNTQ99583 582 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 SLC6A7Q99884 636 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 PAPOLGQ9BWT3 736 aaKnown RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 RNF167Q9H6Y7 350 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 GPR84Q9NQS5 396 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 CLN6Q9NWW5 311 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 H2AFY2Q9P0M6 372 aaPredicted RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 KAAG1Q9UBP8 84 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 CLN8Q9UBY8 286 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF69Q9UC07 566 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 ZNF391Q9UJN7 358 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 LSM2Q9Y333 95 aaKnown RBP5.96□□□□□ -1.46
LSAMP-203ENST00000474851 MPC1Q9Y5U8 109 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 TMEM14AQ9Y6G1 99 aa5.96□□□□□ -1.46
LSAMP-203ENST00000474851 IGHV3OR15-7A0A075B7D8 119 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 A0A1B0GW55 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 A0A1W2PQL4 384 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 hCG_1807616A0A1W2PRN6 198 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 A6NLC8 198 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 SRRM5B3KS81 715 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 J3QRE1 110 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DNASE2O00115 360 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 ADAM20O43506 726 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 ORC5O43913 435 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 RGS9O75916 674 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 PLATP00750 562 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 TTRP02766 147 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L2P0CJ85 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L3P0CJ86 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L4P0CJ87 422 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L5P0CJ88 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L6P0CJ89 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L7P0CJ90 424 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 IGHV4-38-2P0DP08 117 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 MMP9P14780 707 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 ARSBP15848 533 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 MUC1P15941 1255 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 C21orf33P30042 268 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 RPS19P39019 145 aaKnown RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 TGM4P49221 684 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 SMCPP49901 116 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 RORCP51449 518 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 RIDAP52758 137 aaKnown RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 EGR3Q06889 387 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 SCGB2A2Q13296 93 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 EXOSC2Q13868 293 aaKnown RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DMRTC1Q5HYR2 192 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 NHLRC3Q5JS37 347 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 ATPAF1Q5TC12 328 aaPredicted RBP5.95□□□□□ -1.46
LSAMP-203ENST00000474851 TMEM42Q69YG0 159 aa5.95□□□□□ -1.46
LSAMP-203ENST00000474851 DUX4L9Q6RFH8 374 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms