RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PLPP2O43688 288 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PRKNO60260 465 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 GAGE7O76087 117 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 OR7C1O76099 320 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 DIRAS1O95057 198 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 GAGE12FP0CL80 117 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 GAGE12GP0CL81 117 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 GAGE12IP0CL82 117 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CPMP14384 443 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 TNFRSF1BP20333 461 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 COL8A1P27658 744 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 MAP2K3P46734 347 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 OR12D2P58182 307 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CFHR1Q03591 330 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 GAGE4Q13068 117 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 IQCJQ1A5X6 159 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZFAND6Q6FIF0 208 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HEPN1Q6WQI6 88 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZNF440Q8IYI8 595 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 IQCF1Q8N6M8 205 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SAMD12Q8N8I0 201 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PP6455Q8WZ26 134 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 MOB3AQ96BX8 217 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ANAPC13Q9BS18 74 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 TSSK6Q9BXA6 273 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RBKSQ9H477 322 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 TPSG1Q9NRR2 321 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CCNL1Q9UK58 526 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 RALYQ9UKM9 306 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 TBX21Q9UL17 535 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PKIGQ9Y2B9 76 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 LOXL2Q9Y4K0 774 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RNF17Q9BXT8 1623 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 PREX1Q8TCU6 1659 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CDC14CA4D256 554 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PLA2G10O15496 165 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 FAM20BO75063 409 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 TNFSF13O75888 250 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SNAPC5O75971 98 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 KLF8O95600 359 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 CELA2AP08217 269 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 IGLC1P0CG04 106 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SP9P0CG40 484 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ACRV1P26436 265 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 IMPA1P29218 277 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CMPK1P30085 196 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PPIFP30405 207 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 NTSP30990 170 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SLC18A1P54219 525 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RBM39Q14498 530 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 KCTD1Q719H9 257 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HAPLN4Q86UW8 402 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 BADQ92934 168 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 UPRTQ96BW1 309 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RTP4Q96DX8 246 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HSPB9Q9BQS6 159 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 LACRTQ9GZZ8 138 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZNF703Q9H7S9 590 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 GPR84Q9NQS5 396 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ABT1Q9ULW3 272 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 DHDHQ9UQ10 334 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HS3ST3B1Q9Y662 390 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ABCA6Q8N139 1617 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 EHBP1L1Q8N3D4 1523 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CUL7Q14999 1698 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 TUBGCP6Q96RT7 1819 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PRAMEF33A0A0G2JMD5 474 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 BTNL10A8MVZ5 291 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 KBTBD11O94819 623 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 C1orf105O95561 183 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 MOSP00540 346 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PVRP15151 417 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CXCL2P19875 107 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 BLVRBP30043 206 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 TGFBR1P36897 503 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RAB8AP61006 207 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RPL31P62899 125 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 MYBPHQ13203 477 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 RGNQ15493 299 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZNF79Q15937 498 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HLA-DRB5Q30154 266 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 DMRTC1Q5HYR2 192 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 LRRC55Q6ZSA7 311 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZNF429Q86V71 674 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SLC22A18ASQ8N1D0 253 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 LINC01561Q8N1V8 128 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 GATD1Q8NB37 220 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ADAD2Q8NCV1 583 aaKnown RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 ZNF439Q8NDP4 499 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 OR10G7Q8NGN6 311 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 MBD3L2Q8NHZ7 208 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 C11orf45Q8TAV5 145 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 HMGCLL1Q8TB92 370 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 CABLES2Q9BTV7 478 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PRNDQ9UKY0 176 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 BTRCQ9Y297 605 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 PCYT1BQ9Y5K3 369 aaPredicted RBP2.99□□□□□ -1.93
UBR3-208ENST00000474426 V9GYH0 126 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 SYCP2Q9BX26 1530 aa2.99□□□□□ -1.93
UBR3-208ENST00000474426 ANKRD36CQ5JPF3 1778 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms