RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 TMEM187Q14656 261 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 LRTM2Q8N967 370 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 ZFP62Q8NB50 900 aaPredicted RBP12.71□□□□□ -0.37
SAMM50-203ENST00000474323 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 HIPK2Q9H2X6 1198 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 CDH20Q9HBT6 801 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 PRTFDC1Q9NRG1 225 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 THADAQ6YHU6 1953 aa12.71□□□□□ -0.37
SAMM50-203ENST00000474323 BLACEA4D250 179 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 FOXI3A8MTJ6 420 aaPredicted RBP12.71□□□□□ -0.38
SAMM50-203ENST00000474323 K7ESF4 209 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 CA11O75493 328 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 CD200P41217 278 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 FBXL14Q8N1E6 418 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 ZNF248Q8NDW4 579 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 OR5L2Q8NGL0 311 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 OR14L1PQ8NHC6 308 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 MAFAQ8NHW3 353 aaPredicted RBP12.71□□□□□ -0.38
SAMM50-203ENST00000474323 SLAMF6Q96DU3 332 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 GPR84Q9NQS5 396 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 RCL1Q9Y2P8 373 aaKnown RBP12.71□□□□□ -0.38
SAMM50-203ENST00000474323 CLDN16Q9Y5I7 305 aa12.71□□□□□ -0.38
SAMM50-203ENST00000474323 NCOR1O75376 2440 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 DMDP11532 3685 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 HSPA12AO43301 675 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 HCRTR2O43614 444 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 PRKNO60260 465 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 NPIPB7O75200 414 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 GOSR1O95249 250 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 PNLIPP16233 465 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 SFTPDP35247 375 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 PIGPP57054 158 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 EWSR1Q01844 656 aaKnown RBP eCLIP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 GNMTQ14749 295 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 TAF9Q16594 264 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 COA6Q5JTJ3 125 aaKnown RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 FBXW12Q6X9E4 464 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 UBALD2Q8IYN6 164 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 OR51E1Q8TCB6 317 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 ADGRG7Q96K78 797 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 GPER1Q99527 375 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 ABHD14AQ9BUJ0 271 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 SNHG12Q9BXW3 62 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 PECRQ9BY49 303 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 A0A0J9YY10 115 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 C19orf67A6NJJ6 358 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 CRYABP02511 175 aaKnown RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 OPN1MWP04001 364 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 CLPSP04118 112 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 HPNP05981 417 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 OPN1MW2P0DN77 364 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 OPN1MW3P0DN78 364 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 BLVRBP30043 206 aaPredicted RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 APLNRP35414 380 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
SAMM50-203ENST00000474323 SLC16A14Q7RTX9 510 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 GPR137CQ8N3F9 429 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 OR1P1Q8NH06 330 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 BOD1Q96IK1 185 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 PCED1AQ9H1Q7 454 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 HSF4Q9ULV5 492 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
SAMM50-203ENST00000474323 A0A1B0GU03 582 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-203ENST00000474323 M0R143 59 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 HBE1P02100 147 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 GP1BBP13224 206 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 FUT3P21217 361 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 FMODQ06828 376 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 DEFB133Q30KQ1 61 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 OOSP2Q86WS3 158 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 C18orf12Q96KH6 178 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 MOB1AQ9H8S9 216 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 ZNF701Q9NV72 531 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-203ENST00000474323 FRYLO94915 3013 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 GEMIN2O14893 280 aaKnown RBP12.69□□□□□ -0.38
SAMM50-203ENST00000474323 PDGFBP01127 241 aaPredicted RBP12.69□□□□□ -0.38
SAMM50-203ENST00000474323 TK1P04183 234 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 NR2C1P13056 603 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 RPL23AP62750 156 aaKnown RBP12.69□□□□□ -0.38
SAMM50-203ENST00000474323 OR10A7Q8NGE5 316 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 OR52M1Q8NGK5 317 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 OR4X1Q8NH49 305 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 VAX2Q9UIW0 290 aa12.69□□□□□ -0.38
SAMM50-203ENST00000474323 ASXL3Q9C0F0 2248 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 PITX3O75364 302 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 PGCP20142 388 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 CSNK1A1P48729 337 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 NXPH1P58417 271 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 SP6Q3SY56 376 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 ARMC6Q6NXE6 501 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 LIAT1Q6ZQX7 453 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 OR2C3Q8N628 320 aa12.68□□□□□ -0.38
SAMM50-203ENST00000474323 PRR7Q8TB68 274 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms