RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FLVCR2Q9UPI3 526 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 BAIAP2Q9UQB8 552 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 ST3GAL6Q9Y274 331 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 RCL1Q9Y2P8 373 aaKnown RBP2.95□□□□□ -1.94
BRCA1-212ENST00000473961 TPRKBQ9Y3C4 175 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 HSPB11Q9Y547 144 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 U3KQ87 197 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 COL1A1P02452 1464 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-212ENST00000473961 AKAP11Q9UKA4 1901 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 RGPD8O14715 1765 aaPredicted RBP2.95□□□□□ -1.94
BRCA1-212ENST00000473961 LAMB2P55268 1798 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 RGPD5Q99666 1765 aa2.95□□□□□ -1.94
BRCA1-212ENST00000473961 MYH9P35579 1960 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RIC1Q4ADV7 1423 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 IGLV11-55A0A075B6I3 123 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 A0A1W2PRF3 423 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 A0A1W2PRM7 423 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 OR6C74A6NCV1 312 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 A6NDX4 124 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 PRORSD1PA6NEY8 169 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 FAM159BA6NKW6 160 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 BBIP1A8MTZ0 92 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 EFCAB9A8MZ26 197 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NDUFS8O00217 210 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 EIF1BO60739 113 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NIPSNAP2O75323 286 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SLC25A27O95847 323 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 S100A8P05109 93 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SMIM6P0DI80 62 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NR2C1P13056 603 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 HLA-EP13747 358 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RAB5AP20339 215 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 PTNP21246 168 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 MYL9P24844 172 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 GABRR2P28476 465 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RPL22P35268 128 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 MAS1LP35410 378 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 CEACAM3P40198 252 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 CEACAM6P40199 344 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 EIF1P41567 113 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RPL35P42766 123 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RPL14P50914 215 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 AKR1D1P51857 326 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NCBP2P52298 156 aaKnown RBP eCLIP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SNAP25P60880 206 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 PSMC5P62195 406 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ARG2P78540 354 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 TFAMQ00059 246 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 EMX1Q04741 257 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 DMC1Q14565 340 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 PSG5Q15238 335 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 TFDP3Q5H9I0 405 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 PABPC1L2AQ5JQF8 200 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 N4BP2L1Q5TBK1 243 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 KDM4DQ6B0I6 523 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 LAMTOR1Q6IAA8 161 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 LCN8Q6JVE9 175 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF530Q6P9A1 599 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NPSR1Q6W5P4 371 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 LINC00173Q6ZV60 143 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 FAM122BQ7Z309 247 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ABHD12BQ7Z5M8 362 aaPredicted RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SNX20Q7Z614 316 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ZNF429Q86V71 674 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 C10orf107Q8IVU9 208 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SPAG16Q8N0X2 631 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 FAM58AQ8N1B3 248 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 EIF4E3Q8N5X7 224 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 C12orf29Q8N999 325 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 Q8N9W7 124 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 OR52E2Q8NGJ4 325 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 OR13C9Q8NGT0 318 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RDH5Q92781 318 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 TCEAL3Q969E4 200 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ISOC2Q96AB3 205 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 C19orf60Q96EN9 201 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 RNF145Q96MT1 663 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 MND1Q9BWT6 205 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 UGT2B28Q9BY64 529 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 GAL3ST2Q9H3Q3 398 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 NXF3Q9H4D5 531 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SYNDIG1Q9H7V2 258 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 DMAC2Q9NW81 257 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 SCN3BQ9NY72 215 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 CTSFQ9UBX1 484 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 OR12D3Q9UGF7 316 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 MRPS18BQ9Y676 258 aaKnown RBP2.94□□□□□ -1.94
BRCA1-212ENST00000473961 DIP2CQ9Y2E4 1556 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 FER1L6Q2WGJ9 1857 aa2.94□□□□□ -1.94
BRCA1-212ENST00000473961 ASTN1O14525 1302 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SIGLEC1Q9BZZ2 1709 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TOGARAM1Q9Y4F4 1720 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 SIPA1L3O60292 1781 aaPredicted RBP2.93□□□□□ -1.94
BRCA1-212ENST00000473961 ARFGEF2Q9Y6D5 1785 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 TOPAZ1Q8N9V7 1692 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 DUOX1Q9NRD9 1551 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 PLIN4Q96Q06 1357 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 hCG_1818297A0A087WSY0 165 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 RAB19A4D1S5 217 aa2.93□□□□□ -1.94
BRCA1-212ENST00000473961 KPNA3O00505 521 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms