RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 OR4M1Q8NGD0 313 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 DUX5Q96PT3 197 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 NEK6Q9HC98 313 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 DSCAML1Q8TD84 2053 aa15.55■□□□□ 0.08
PTCD3-210ENST00000473829 IGHV1-69DA0A0B4J2H0 117 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 TMEM82A0PJX8 343 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 DNAJC9-AS1A6NH13 148 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 K7N7A8 449 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 GABRPO00591 440 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 HAND1O96004 215 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 IGHV1-69P01742 117 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 CD2P06729 351 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 CHRM2P08172 466 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 TAS2R43P59537 309 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 KLRD1Q13241 179 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 DEFB112Q30KQ8 113 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 OR52N4Q8NGI2 321 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 TNFRSF14Q92956 283 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 CDCA4Q9BXL8 241 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 HMG20AQ9NP66 347 aa15.54■□□□□ 0.08
PTCD3-210ENST00000473829 LSM2Q9Y333 95 aaKnown RBP15.54■□□□□ 0.08
PTCD3-210ENST00000473829 RNASEK-C17orf49H0YIS7 233 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 CELP19835 753 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 RPL31P62899 125 aaKnown RBP15.53■□□□□ 0.08
PTCD3-210ENST00000473829 UBA52P62987 128 aaKnown RBP15.53■□□□□ 0.08
PTCD3-210ENST00000473829 ZNF273Q14593 569 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 IRF3Q14653 427 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 ZNF146Q15072 292 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 YIF1BQ5BJH7 314 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 RNLSQ5VYX0 342 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 TMEM200BQ69YZ2 307 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 C17orf107Q6ZR85 190 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 SAXO1Q8IYX7 474 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 CMTM4Q8IZR5 234 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 SPATA3Q8NHX4 192 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 OR14A2Q96R54 314 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 OR5M11Q96RB7 305 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 JMJD8Q96S16 334 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 FAM234AQ9H0X4 552 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 SCN3BQ9NY72 215 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 ERGIC3Q9Y282 383 aa15.53■□□□□ 0.08
PTCD3-210ENST00000473829 STAB1Q9NY15 2570 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 TRAV8-7A0A075B6U6 113 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 MEX3AA1L020 520 aaKnown RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 MAGEA13PA6NCF6 341 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 M0R1W7 72 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 PSPNO60542 156 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 TMEM225BP0DP42 221 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 CCL3L1P16619 93 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 IGFBP3P17936 291 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 HSPA13P48723 471 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 Q499Y3 187 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 METAP1DQ6UB28 335 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 RBMS3Q6XE24 437 aaKnown RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 SATL1Q86VE3 508 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 PNKDQ8N490 385 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 PIP4P2Q8N4L2 257 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 ZSCAN4Q8NAM6 433 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 ZFAND2BQ8WV99 257 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 MYDGFQ969H8 173 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 CNBD2Q96M20 576 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 MND1Q9BWT6 205 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 CHST6Q9GZX3 395 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 DUSP21Q9H596 190 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 SEBOXQ9HB31 216 aaPredicted RBP15.52■□□□□ 0.08
PTCD3-210ENST00000473829 GSTK1Q9Y2Q3 226 aa15.52■□□□□ 0.08
PTCD3-210ENST00000473829 TRBV5-7A0A0A0MS05 114 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 TRIM77I1YAP6 450 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 CRHBPP24387 322 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 OR3A4PP47883 348 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 BPIFB3P59826 476 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 ERVFRD-1P60508 538 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 BAMBIQ13145 260 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 SPIN3Q5JUX0 258 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 HCP5Q6MZN7 132 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 FIP1L1Q6UN15 594 aaKnown RBP15.51■□□□□ 0.07
PTCD3-210ENST00000473829 C1orf122Q6ZSJ8 110 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 TCF23Q7RTU1 214 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 OR8H2Q8N162 312 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 C11orf42Q8N5U0 333 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 TNFAIP8L1Q8WVP5 186 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 SNX22Q96L94 193 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 PRDM13Q9H4Q3 707 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 ANK2Q01484 3957 aa15.51■□□□□ 0.07
PTCD3-210ENST00000473829 A0A0U1RQK1 487 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 A0A1W2PPK0 400 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 A0A1W2PRD5 423 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 A0A1W2PRF3 423 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 A0A1W2PRM7 423 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 SIRPB1O00241 398 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 OR2H2O95918 312 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 ALDOBP05062 364 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 CD1AP06126 327 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 FSTP19883 344 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 VHLP40337 213 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 OR3A1P47881 315 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 EDDM3BP56851 147 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 PPP3R1P63098 170 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 BDH1Q02338 343 aa15.5■□□□□ 0.07
PTCD3-210ENST00000473829 ACSM1Q08AH1 577 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms