RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 HAND1O96004 215 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 MT-ND2P03891 347 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 LMO1P25800 156 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 HTR1DP28221 377 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 EPHA2P29317 976 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 ARHGDIBP52566 201 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 CD83Q01151 205 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 BDH1Q02338 343 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 ZNF91Q05481 1191 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 SLC25A30Q5SVS4 291 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 LDLRAD2Q5SZI1 272 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 SLC25A26Q70HW3 274 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 TCF23Q7RTU1 214 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 BCDIN3DQ7Z5W3 292 aaKnown RBP10.89□□□□□ -0.67
CHD3-209ENST00000473376 FAM58AQ8N1B3 248 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 ZNF596Q8TC21 504 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 MYCBPQ99417 103 aaPredicted RBP10.89□□□□□ -0.67
CHD3-209ENST00000473376 GABARAPL3Q9BY60 117 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 TTTY10Q9BZA0 68 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 GAL3ST2Q9H3Q3 398 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 LIN7BQ9HAP6 207 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 TAS2R3Q9NYW6 316 aa10.89□□□□□ -0.67
CHD3-209ENST00000473376 PLXNB1O43157 2135 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 OOSP1A8MZH6 123 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 F8VVB4 439 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 F8VWA3 439 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 MAGEB4O15481 346 aaPredicted RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 RPP14O95059 124 aaKnown RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 ALX3O95076 343 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 CSN2P05814 226 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 CD28P10747 220 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 PIPP12273 146 aaPredicted RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 CD34P28906 385 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 BRS3P32247 399 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 RAB13P51153 203 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 CCR9P51686 369 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 GRK1Q15835 563 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 Q6ZPA2 131 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 LHFPL2Q6ZUX7 228 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 SSX6Q7RTT6 188 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 FAM220AQ7Z4H9 259 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 SAXO1Q8IYX7 474 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 ZNF676Q8N7Q3 588 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 CHST4Q8NCG5 386 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 TRMT10AQ8TBZ6 339 aaKnown RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 EMG1Q92979 244 aaKnown RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 MBOAT4Q96T53 435 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 NKX3-1Q99801 234 aaPredicted RBP10.88□□□□□ -0.67
CHD3-209ENST00000473376 OCSTAMPQ9BR26 566 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 NEK6Q9HC98 313 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 DPM3Q9P2X0 92 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 AP4S1Q9Y587 144 aa10.88□□□□□ -0.67
CHD3-209ENST00000473376 A0A087X0M5 115 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 A0A1B0GX30 115 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 A6NIN4 97 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 M0QZK8 103 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 SH2D1BO14796 132 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 PIN1P1O15428 100 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 PSPNO60542 156 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 MITFO75030 526 aaPredicted RBP10.87□□□□□ -0.67
CHD3-209ENST00000473376 DUS4LO95620 317 aaKnown RBP10.87□□□□□ -0.67
CHD3-209ENST00000473376 ATP6V1E1P36543 226 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 VDAC2P45880 294 aaPredicted RBP10.87□□□□□ -0.67
CHD3-209ENST00000473376 MTCP1P56278 107 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 P2RX3P56373 397 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 LOXL3P58215 753 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 DYNC1I2Q13409 638 aaKnown RBP10.87□□□□□ -0.67
CHD3-209ENST00000473376 PRSS35Q8N3Z0 413 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 C11orf44Q8N8P7 122 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 OR52N4Q8NGI2 321 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 OR4P4Q8NGL7 312 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 BCAS4Q8TDM0 211 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 SLAMF9Q96A28 289 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 R3HDM4Q96D70 268 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 CITED2Q99967 270 aaPredicted RBP10.87□□□□□ -0.67
CHD3-209ENST00000473376 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 MMP28Q9H239 520 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 NCOR1P1Q9H4R4 102 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 HMG20AQ9NP66 347 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 PCDHGB5Q9Y5G0 923 aa10.87□□□□□ -0.67
CHD3-209ENST00000473376 TRGV10A0A0A0MS01 117 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 IGKV1-9A0A0C4DH69 117 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 LOC107986453A0A1B0GWG9 222 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 LEUTXA8MZ59 168 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 ENTPD6O75354 484 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 ATP5HO75947 161 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 IGLV1-47P01700 117 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 ATF1P18846 271 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 GABRR1P24046 479 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 PAX6P26367 422 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 CEACAM3P40198 252 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 BLCAPP62952 87 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 SLC34A1Q06495 639 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 BNIP1Q12981 228 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 PDZK1IP1Q13113 114 aa10.86□□□□□ -0.67
CHD3-209ENST00000473376 HABP2Q14520 560 aaPredicted RBP10.86□□□□□ -0.67
CHD3-209ENST00000473376 CCDC144NLQ6NUI1 221 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms