RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TP53I11O14683 189 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 CCL4P13236 92 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 AGAP20933 346 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 FKBP2P26885 142 aaKnown RBP18.31■□□□□ 0.52
COL18A1-207ENST00000473212 SLC22A25Q6T423 547 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 OR11L1Q8NGX0 322 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 ALKBH3Q96Q83 286 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-207ENST00000473212 FOXD3Q9UJU5 478 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-207ENST00000473212 HSF4Q9ULV5 492 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 CCDC187A0A096LP49 1063 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 UMAD1C9J7I0 102 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 H7C1Q1 480 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 GEMIN2O14893 280 aaKnown RBP18.31■□□□□ 0.52
COL18A1-207ENST00000473212 LIFP15018 202 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 ZNF14P17017 642 aaPredicted RBP18.31■□□□□ 0.52
COL18A1-207ENST00000473212 DTYMKP23919 212 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 FBXW12Q6X9E4 464 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 LIAT1Q6ZQX7 453 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 C18orf12Q96KH6 178 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 FBXO7Q9Y3I1 522 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 FREM1Q5H8C1 2179 aa18.31■□□□□ 0.52
COL18A1-207ENST00000473212 IGKV1-12A0A0C4DH73 117 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 IGKV1D-12P01611 117 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 ARG1P05089 322 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 CHATP28329 748 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 ASCL1P50553 236 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 HPSE2Q8WWQ2 592 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 SPSB1Q96BD6 273 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 IGHV1-45A0A0A0MS14 117 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 B4GALT1P15291 398 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 STARD6P59095 220 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 FABP9Q0Z7S8 132 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 GPR157Q5UAW9 335 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 FGFBP3Q8TAT2 258 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 CD300LFQ8TDQ1 290 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 SAP25Q8TEE9 199 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 MSI2Q96DH6 328 aaKnown RBP18.3■□□□□ 0.52
COL18A1-207ENST00000473212 SUCNR1Q9BXA5 334 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 DKKL1Q9UK85 242 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 RCL1Q9Y2P8 373 aaKnown RBP18.3■□□□□ 0.52
COL18A1-207ENST00000473212 KIAA1549Q9HCM3 1950 aa18.3■□□□□ 0.52
COL18A1-207ENST00000473212 S100A9P06702 114 aaKnown RBP18.29■□□□□ 0.52
COL18A1-207ENST00000473212 SMIM6P0DI80 62 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 COX6A1P12074 109 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 DUSP1P28562 367 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 GLP1RP43220 463 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 Q6ZPA2 131 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 YRDCQ86U90 279 aaKnown RBP18.29■□□□□ 0.52
COL18A1-207ENST00000473212 FAM24BQ8N5W8 94 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 OR10AD1Q8NGE0 317 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 MR1Q95460 341 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 CRLF2Q9HC73 371 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 HS3ST3B1Q9Y662 390 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 FAM186AA6NE01 2351 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 NSG1A0A0A6YYJ2 146 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 S100A8P05109 93 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 CXCL12P48061 93 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 LRTM2Q8N967 370 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 RSRP1Q9BUV0 290 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 TUBA4BQ9H853 241 aa18.29■□□□□ 0.52
COL18A1-207ENST00000473212 ST8SIA3O43173 380 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 PHF1O43189 567 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 OR13C7P0DN81 318 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 RAB5AP20339 215 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 SUCLG1P53597 346 aaKnown RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 TMEM182Q6ZP80 229 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 MAML2Q8IZL2 1156 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 BORCS8Q96FH0 119 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 TAAR9Q96RI9 348 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 ZNF407Q9C0G0 2248 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 A0A1W2PPE2 198 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 LINC00587B1AMM8 73 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 EIF1BO60739 113 aaKnown RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 KLF7O75840 302 aaPredicted RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 CRYGSP22914 178 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 PPP1CCP36873 323 aaKnown RBP18.28■□□□□ 0.52
COL18A1-207ENST00000473212 SULT1A1P50225 295 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 HLA-BQ31612 363 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 LGI3Q8N145 548 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 CCDC54Q8NEL0 328 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 IMMP1LQ96LU5 166 aa18.28■□□□□ 0.52
COL18A1-207ENST00000473212 F10P00742 488 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 LCATP04180 440 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 RBP2P50120 134 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 IL13RA2Q14627 380 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 CNN3Q15417 329 aaKnown RBP18.27■□□□□ 0.52
COL18A1-207ENST00000473212 FAM27BQ5VT28 67 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 ADAM5Q6NVV9 412 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 MEX3BQ6ZN04 569 aaKnown RBP18.27■□□□□ 0.52
COL18A1-207ENST00000473212 FBXL14Q8N1E6 418 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 KDF1Q8NAX2 398 aaPredicted RBP18.27■□□□□ 0.52
COL18A1-207ENST00000473212 FAM213BQ8TBF2 198 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 SLC35B3Q9H1N7 401 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 KCNJ16Q9NPI9 418 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 RFNGQ9Y644 331 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 VAMP5O95183 116 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 ANGPTL4Q9BY76 406 aa18.27■□□□□ 0.52
COL18A1-207ENST00000473212 STRAPQ9Y3F4 350 aaKnown RBP18.27■□□□□ 0.52
COL18A1-207ENST00000473212 A0A087WZY1 265 aa18.26■□□□□ 0.51
COL18A1-207ENST00000473212 SYNGR3O43761 229 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms