RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PNMTP11086 282 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 RBMXP38159 391 aaKnown RBP8.84□□□□□ -0.99
APTX-216ENST00000472896 NPY4RP50391 375 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 CCL11P51671 97 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 GFERP55789 205 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 ERVFRD-1P60508 538 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 ERVFC1-1P60608 527 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 PNRC1Q12796 327 aaPredicted RBP8.84□□□□□ -0.99
APTX-216ENST00000472896 RAB35Q15286 201 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 MEP1BQ16820 701 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 TMEM176BQ3YBM2 270 aaPredicted RBP8.84□□□□□ -0.99
APTX-216ENST00000472896 C5orf24Q7Z6I8 188 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 ZNF429Q86V71 674 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 PRR18Q8N4B5 295 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 OR13C3Q8NGS6 347 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 OR13C9Q8NGT0 318 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 FNDC9Q8TBE3 224 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 MACROD1Q9BQ69 325 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 NIPSNAP3BQ9BS92 247 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 WNT5BQ9H1J7 359 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 Q9N2J8 555 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 VAX2Q9UIW0 290 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 SLC22A13Q9Y226 551 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 B3GALT5Q9Y2C3 310 aa8.84□□□□□ -0.99
APTX-216ENST00000472896 SPENQ96T58 3664 aaKnown RBP8.84□□□□□ -0.99
APTX-216ENST00000472896 TRBV24-1A0A075B6N3 115 aa8.84□□□□□ -1
APTX-216ENST00000472896 MASP2O00187 686 aa8.84□□□□□ -1
APTX-216ENST00000472896 STATHP02808 62 aa8.84□□□□□ -1
APTX-216ENST00000472896 RPLP1P05386 114 aaKnown RBP8.84□□□□□ -1
APTX-216ENST00000472896 OR5H8P0DN80 308 aa8.84□□□□□ -1
APTX-216ENST00000472896 RPS2P15880 293 aaKnown RBP8.84□□□□□ -1
APTX-216ENST00000472896 ZNF10P21506 573 aaPredicted RBP8.84□□□□□ -1
APTX-216ENST00000472896 CCKARP32238 428 aa8.84□□□□□ -1
APTX-216ENST00000472896 MMP16P51512 607 aa8.84□□□□□ -1
APTX-216ENST00000472896 QRFPP83859 136 aa8.84□□□□□ -1
APTX-216ENST00000472896 HHEXQ03014 270 aa8.84□□□□□ -1
APTX-216ENST00000472896 MFGE8Q08431 387 aaPredicted RBP8.84□□□□□ -1
APTX-216ENST00000472896 ZNF74Q16587 644 aa8.84□□□□□ -1
APTX-216ENST00000472896 ZNF506Q5JVG8 444 aa8.84□□□□□ -1
APTX-216ENST00000472896 CYB5R2Q6BCY4 276 aa8.84□□□□□ -1
APTX-216ENST00000472896 ABLIM2Q6H8Q1 611 aa8.84□□□□□ -1
APTX-216ENST00000472896 ZNF343Q6P1L6 599 aa8.84□□□□□ -1
APTX-216ENST00000472896 SLC25A26Q70HW3 274 aa8.84□□□□□ -1
APTX-216ENST00000472896 SGPP2Q8IWX5 399 aa8.84□□□□□ -1
APTX-216ENST00000472896 SLC22A24Q8N4F4 322 aa8.84□□□□□ -1
APTX-216ENST00000472896 APCDD1LQ8NCL9 501 aa8.84□□□□□ -1
APTX-216ENST00000472896 OR2L3Q8NG85 312 aa8.84□□□□□ -1
APTX-216ENST00000472896 OR5H2Q8NGV7 314 aa8.84□□□□□ -1
APTX-216ENST00000472896 CT55Q8WUE5 264 aa8.84□□□□□ -1
APTX-216ENST00000472896 TSSK2Q96PF2 358 aa8.84□□□□□ -1
APTX-216ENST00000472896 LMF2Q9BU23 707 aaKnown RBP8.84□□□□□ -1
APTX-216ENST00000472896 OPN3Q9H1Y3 402 aaPredicted RBP8.84□□□□□ -1
APTX-216ENST00000472896 CDH20Q9HBT6 801 aa8.84□□□□□ -1
APTX-216ENST00000472896 TBC1D29Q9UFV1 150 aa8.84□□□□□ -1
APTX-216ENST00000472896 C14orf166Q9Y224 244 aaKnown RBP8.84□□□□□ -1
APTX-216ENST00000472896 OSGIN2Q9Y236 505 aa8.84□□□□□ -1
APTX-216ENST00000472896 POLQO75417 2590 aa8.83□□□□□ -1
APTX-216ENST00000472896 TRDCB7Z8K6 153 aa8.83□□□□□ -1
APTX-216ENST00000472896 CLDN34H7C241 214 aa8.83□□□□□ -1
APTX-216ENST00000472896 B3GALT2O43825 422 aa8.83□□□□□ -1
APTX-216ENST00000472896 AMBPP02760 352 aa8.83□□□□□ -1
APTX-216ENST00000472896 QDPRP09417 244 aa8.83□□□□□ -1
APTX-216ENST00000472896 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
APTX-216ENST00000472896 TAS2R46P59540 309 aa8.83□□□□□ -1
APTX-216ENST00000472896 RPS15AP62244 130 aaKnown RBP8.83□□□□□ -1
APTX-216ENST00000472896 RPS18P62269 152 aaKnown RBP8.83□□□□□ -1
APTX-216ENST00000472896 SPOCK1Q08629 439 aa8.83□□□□□ -1
APTX-216ENST00000472896 IQCJQ1A5X6 159 aa8.83□□□□□ -1
APTX-216ENST00000472896 SLC22A6Q4U2R8 563 aa8.83□□□□□ -1
APTX-216ENST00000472896 SAPCD1Q5SSQ6 148 aa8.83□□□□□ -1
APTX-216ENST00000472896 SLC16A14Q7RTX9 510 aa8.83□□□□□ -1
APTX-216ENST00000472896 ARHGEF39Q8N4T4 335 aa8.83□□□□□ -1
APTX-216ENST00000472896 CSNK1A1LQ8N752 337 aa8.83□□□□□ -1
APTX-216ENST00000472896 OR4D6Q8NGJ1 314 aa8.83□□□□□ -1
APTX-216ENST00000472896 OR1P1Q8NH06 330 aa8.83□□□□□ -1
APTX-216ENST00000472896 FGGYQ96C11 551 aa8.83□□□□□ -1
APTX-216ENST00000472896 ACY3Q96HD9 319 aa8.83□□□□□ -1
APTX-216ENST00000472896 NRTNQ99748 197 aa8.83□□□□□ -1
APTX-216ENST00000472896 TMEM208Q9BTX3 173 aa8.83□□□□□ -1
APTX-216ENST00000472896 OR8D2Q9GZM6 311 aa8.83□□□□□ -1
APTX-216ENST00000472896 CTDSP1Q9GZU7 261 aa8.83□□□□□ -1
APTX-216ENST00000472896 HIPK2Q9H2X6 1198 aa8.83□□□□□ -1
APTX-216ENST00000472896 LYRM4Q9HD34 91 aa8.83□□□□□ -1
APTX-216ENST00000472896 FOXD3Q9UJU5 478 aaPredicted RBP8.83□□□□□ -1
APTX-216ENST00000472896 R4GMQ9 66 aa8.83□□□□□ -1
APTX-216ENST00000472896 TMEM14DPA8MWL7 114 aa8.82□□□□□ -1
APTX-216ENST00000472896 GPR89AB7ZAQ6 455 aa8.82□□□□□ -1
APTX-216ENST00000472896 PPP5D1E7EU14 171 aa8.82□□□□□ -1
APTX-216ENST00000472896 H3BSH0 61 aa8.82□□□□□ -1
APTX-216ENST00000472896 TIAF1O95411 115 aa8.82□□□□□ -1
APTX-216ENST00000472896 PNPP00491 289 aa8.82□□□□□ -1
APTX-216ENST00000472896 HBE1P02100 147 aa8.82□□□□□ -1
APTX-216ENST00000472896 OPN1MWP04001 364 aa8.82□□□□□ -1
APTX-216ENST00000472896 ASAH2BP0C7U1 165 aa8.82□□□□□ -1
APTX-216ENST00000472896 GPR89BP0CG08 455 aa8.82□□□□□ -1
APTX-216ENST00000472896 ZNF888P0CJ79 500 aaPredicted RBP8.82□□□□□ -1
APTX-216ENST00000472896 SMIM10L1P0DMW3 83 aa8.82□□□□□ -1
APTX-216ENST00000472896 OPN1MW2P0DN77 364 aa8.82□□□□□ -1
APTX-216ENST00000472896 OPN1MW3P0DN78 364 aa8.82□□□□□ -1
APTX-216ENST00000472896 RAC2P15153 192 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms