RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 TPPPO94811 219 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 PLATP00750 562 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 CHRM2P08172 466 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 CLEC2LP0C7M8 214 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 LYNX1P0DP58 116 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 PSG2P11465 335 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 MGMTP16455 207 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 KCNJ3P48549 501 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 NPY4RP50391 375 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 RBM11P57052 281 aaKnown RBP13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 RPS27AP62979 156 aaKnown RBP13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 HNRNPA0Q13151 305 aaKnown RBP13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 ARL6IP1Q15041 203 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 SLC22A6Q4U2R8 563 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 Q5PR19 223 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 HES5Q5TA89 166 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 MZT2AQ6P582 158 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 TGIF2LYQ8IUE0 185 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 KRTAP1-3Q8IUG1 177 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 ZNF561Q8N587 486 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 OR51D1Q8NGF3 324 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 Q96M66 194 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 TMEM59Q9BXS4 323 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 BARHL1Q9BZE3 327 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 NXF2Q9GZY0 626 aaKnown RBP13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 WDR13Q9H1Z4 485 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 RBFOX1Q9NWB1 397 aaKnown RBP13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 ST3GAL6Q9Y274 331 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 DOCK11Q5JSL3 2073 aa13.43□□□□□ -0.26
PCOLCE-205ENST00000472348 CCDC168Q8NDH2 2452 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 IGHV3-64DA0A0J9YX35 117 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 METTL21EPA6NDL7 271 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 POM121CA8CG34 1229 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 F5H0A9 414 aaPredicted RBP13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 F8VVB4 439 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 F8VWA3 439 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 SH2D1BO14796 132 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 HTR3BO95264 441 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 PRKACAP17612 351 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 SERPINA2P20848 420 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 LOXL1Q08397 574 aaPredicted RBP13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 UNC119Q13432 240 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 IDNKQ5T6J7 187 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 RAB12Q6IQ22 244 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 LINC00299Q6ZSB3 139 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 PPP1R35Q8TAP8 253 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 TMEM246Q9BRR3 403 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 BPESC1Q9GZL8 116 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 ABCG5Q9H222 651 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 NCOR1P1Q9H4R4 102 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 ELL3Q9HB65 397 aaPredicted RBP13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 DCAF16Q9NXF7 216 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 OR5V1Q9UGF6 321 aa13.42□□□□□ -0.26
PCOLCE-205ENST00000472348 IGKV1D-17A0A075B6S4 117 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 TMEM272A0A1B0GTI8 110 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 SIGLEC5O15389 551 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 CSN2P05814 226 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 HEXAP06865 529 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 PRDX2P32119 198 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 FOXB2Q5VYV0 432 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 NLRC3Q7RTR2 1065 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 TMEM104Q8NE00 496 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 OR56B1Q8NGI3 324 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 OR5D13Q8NGL4 314 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 RAB39BQ96DA2 213 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 C1orf159Q96HA4 380 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 ZNF488Q96MN9 340 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 GAL3ST1Q99999 423 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 SLIRPQ9GZT3 109 aaKnown RBP13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 LPAR5Q9H1C0 372 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 TREM2Q9NZC2 230 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 HSF4Q9ULV5 492 aa13.41□□□□□ -0.26
PCOLCE-205ENST00000472348 A0A096LNT2 108 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 NKX6-3A6NJ46 265 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 RFPL4AA6NLU0 287 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 RFPL4AL1F8VTS6 287 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 WNT9BO14905 357 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 CA11O75493 328 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 CRTAPO75718 401 aaPredicted RBP13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 HAND1O96004 215 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 APOA1P02647 267 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 WNT2P09544 360 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 SLC2A2P11168 524 aaPredicted RBP13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 CD80P33681 288 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 ART1P52961 327 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 CAV3P56539 151 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 IL13RA1P78552 427 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 P2RY14Q15391 338 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 Q6P435 159 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 NEIL1Q96FI4 390 aaPredicted RBP13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 SNX22Q96L94 193 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 MMP27Q9H306 513 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 RABL2AQ9UBK7 228 aaPredicted RBP13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 RABL2BQ9UNT1 228 aa13.4□□□□□ -0.26
PCOLCE-205ENST00000472348 POLR3KQ9Y2Y1 108 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms