RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 NLE1Q9NVX2 485 aaPredicted RBP1.82□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF229Q9UJW7 825 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 R4GN34 69 aa1.82□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF407Q9C0G0 2248 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 SC5DO75845 299 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 DHRS3O75911 302 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 KLHL2O95198 593 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 RLN2P04090 185 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 DEKP35659 375 aaKnown RBP1.81□□□□□ -2.12
PTCD3-209ENST00000472044 NUP62P37198 522 aaPredicted RBP1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ACOT2P49753 483 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 DSTNP60981 165 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ENDOGQ14249 297 aaKnown RBP1.81□□□□□ -2.12
PTCD3-209ENST00000472044 IHHQ14623 411 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 Q499Y3 187 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ACTL10Q5JWF8 245 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 LDLRAD2Q5SZI1 272 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 RESP18Q5W5W9 173 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 TMEM144Q7Z5S9 345 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ATPAF2Q8N5M1 289 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF75CPQ92670 426 aaPredicted RBP1.81□□□□□ -2.12
PTCD3-209ENST00000472044 GLT1D1Q96MS3 346 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 CIB1Q99828 191 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 SRRQ9GZT4 340 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 NXF2Q9GZY0 626 aaKnown RBP1.81□□□□□ -2.12
PTCD3-209ENST00000472044 RMND1Q9NWS8 449 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF780BQ9Y6R6 833 aa1.81□□□□□ -2.12
PTCD3-209ENST00000472044 NLRC5Q86WI3 1866 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 YLPM1P49750 1951 aaKnown RBP1.8□□□□□ -2.12
PTCD3-209ENST00000472044 IGKV1OR2-108A0A075B7D4 117 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 CD300LBA8K4G0 201 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 H3BQ85 93 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 C15orf65H3BRN8 121 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 FFAR1O14842 300 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 GYG2O15488 501 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 SPOPO43791 374 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 COX7A2P2O60397 106 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 CDK1P06493 297 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 IVLP07476 585 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 CCDC172P0C7W6 258 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
PTCD3-209ENST00000472044 XIAPP98170 497 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 FMODQ06828 376 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 GUSBP1Q15486 140 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 C18orf21Q32NC0 220 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-209ENST00000472044 TMEM215Q68D42 235 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 AMMECR1LQ6DCA0 310 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 GLYATQ6IB77 296 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 WDR59Q6PJI9 974 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 LINC00596Q86U02 117 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 CYP4Z1Q86W10 505 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 ST13P4Q8IZP2 240 aaPredicted RBP1.8□□□□□ -2.12
PTCD3-209ENST00000472044 C3orf22Q8N5N4 141 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 YPEL4Q96NS1 127 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 PLA2G12AQ9BZM1 189 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 DUSP21Q9H596 190 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 SPATA31E1Q6ZUB1 1445 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 SSH2Q76I76 1423 aa1.8□□□□□ -2.12
PTCD3-209ENST00000472044 IGHV3-43A0A0B4J1X8 118 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 A0A1B0GXF2 115 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 NDUFS8O00217 210 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 ENTPD6O75354 484 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 CCNOP22674 350 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 XKP51811 444 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 RAB38P57729 211 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 MEF2BQ02080 365 aaPredicted RBP1.79□□□□□ -2.12
PTCD3-209ENST00000472044 C2orf80Q0P641 193 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 TNXAQ16473 311 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 DEFB134Q4QY38 66 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 ZNF470Q6ECI4 717 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 TPGS1Q6ZTW0 290 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 COMTD1Q86VU5 262 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 AMN1Q8IY45 258 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 OR8S1Q8NH09 359 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 C22orf15Q8WYQ4 148 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 RBPMSQ93062 196 aaKnown RBP1.79□□□□□ -2.12
PTCD3-209ENST00000472044 MSANTD3Q96H12 275 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 PKMYT1Q99640 499 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 COPS4Q9BT78 406 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 RAB1BQ9H0U4 201 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 PLEKHA1Q9HB21 404 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 DNAJC27Q9NZQ0 273 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 TRAPPC1Q9Y5R8 145 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 NRCAMQ92823 1304 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 PLXNB1O43157 2135 aa1.79□□□□□ -2.12
PTCD3-209ENST00000472044 D6RAR5 112 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 PSMD11O00231 422 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 ISLRO14498 428 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 RGS5O15539 181 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 S100A9P06702 114 aaKnown RBP1.78□□□□□ -2.12
PTCD3-209ENST00000472044 CECR9P0C854 216 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 CNTFRP26992 372 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 FOXA1P55317 472 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 KLF3P57682 345 aaPredicted RBP1.78□□□□□ -2.12
PTCD3-209ENST00000472044 STX4Q12846 297 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 BNIP2Q12982 314 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 GPR176Q14439 515 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 PDZD11Q5EBL8 140 aa1.78□□□□□ -2.12
PTCD3-209ENST00000472044 UBE2NLQ5JXB2 153 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms