RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 FIP1L1Q6UN15 594 aaKnown RBP14.66□□□□□ -0.06
VPS72-204ENST00000471423 SVOPQ8N4V2 548 aa14.66□□□□□ -0.06
VPS72-204ENST00000471423 PNLDC1Q8NA58 520 aaKnown RBP14.66□□□□□ -0.06
VPS72-204ENST00000471423 ZSCAN4Q8NAM6 433 aaPredicted RBP14.66□□□□□ -0.06
VPS72-204ENST00000471423 TMEM203Q969S6 136 aa14.66□□□□□ -0.06
VPS72-204ENST00000471423 DCTN5Q9BTE1 182 aa14.66□□□□□ -0.06
VPS72-204ENST00000471423 HMG20AQ9NP66 347 aa14.66□□□□□ -0.06
VPS72-204ENST00000471423 FOXJ3Q9UPW0 622 aa14.66□□□□□ -0.06
VPS72-204ENST00000471423 JMJD1CQ15652 2540 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 SC5DO75845 299 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 HAND1O96004 215 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 DUSP1P28562 367 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 FGF12P61328 243 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 ARMCX4Q5H9R4 360 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 UNQ9370/PRO34162Q6UXP9 181 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 PHC2Q8IXK0 858 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 SPARTQ8N0X7 666 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 TEX29Q8N6K0 151 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 ASCC1Q8N9N2 400 aaKnown RBP14.65□□□□□ -0.06
VPS72-204ENST00000471423 GSTK1Q9Y2Q3 226 aa14.65□□□□□ -0.06
VPS72-204ENST00000471423 FSHBP01225 129 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 PTGFRP43088 359 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 ZNF146Q15072 292 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 SPIN3Q5JUX0 258 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 ZNF773Q6PK81 442 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 CEACAM19Q7Z692 300 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 PRIMA1Q86XR5 153 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 LY6G5BQ8NDX9 201 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 PXT1Q8NFP0 134 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 NANPQ8TBE9 248 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 RHOFQ9HBH0 211 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 LRRC42Q9Y546 428 aa14.64□□□□□ -0.07
VPS72-204ENST00000471423 TK1P04183 234 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 LIPFP07098 398 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 CHRM2P08172 466 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 PPIAL4GP0DN37 164 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 PSMA1P25786 263 aaKnown RBP14.63□□□□□ -0.07
VPS72-204ENST00000471423 GP2P55259 537 aaKnown RBP14.63□□□□□ -0.07
VPS72-204ENST00000471423 ARF6P62330 175 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 RSU1Q15404 277 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 SSX1Q16384 188 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 KCTD21Q4G0X4 260 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 UBE2UQ5VVX9 321 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 JAGN1Q8N5M9 183 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 OR10K1Q8NGX5 313 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 C8orf46Q8TAG6 207 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 PPIL3Q9H2H8 161 aaKnown RBP14.63□□□□□ -0.07
VPS72-204ENST00000471423 TCF7L1Q9HCS4 588 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 ONECUT1Q9UBC0 465 aa14.63□□□□□ -0.07
VPS72-204ENST00000471423 SF3B6Q9Y3B4 125 aaKnown RBP14.63□□□□□ -0.07
VPS72-204ENST00000471423 A0A1W2PQ09 198 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 TMEM82A0PJX8 343 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 ZNF737O75373 536 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 RGS9O75916 674 aaPredicted RBP14.62□□□□□ -0.07
VPS72-204ENST00000471423 CDRT1O95170 752 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 UCHL1P09936 223 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 MMP9P14780 707 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 GABRA5P31644 462 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 MTNR1BP49286 362 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 TRAM1Q15629 374 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 HSD17B12Q53GQ0 312 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 KLF17Q5JT82 389 aaPredicted RBP14.62□□□□□ -0.07
VPS72-204ENST00000471423 METTL11BQ5VVY1 283 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 ASCL4Q6XD76 172 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 TMEM91Q6ZNR0 172 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 NKAIN3Q8N8D7 197 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 UPRTQ96BW1 309 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 WDFY2Q96P53 400 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 PCGF1Q9BSM1 259 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 FAM234AQ9H0X4 552 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 CNTD2Q9H8S5 307 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 SEBOXQ9HB31 216 aaPredicted RBP14.62□□□□□ -0.07
VPS72-204ENST00000471423 EXOSC4Q9NPD3 245 aaKnown RBP14.62□□□□□ -0.07
VPS72-204ENST00000471423 C19orf12Q9NSK7 152 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 GLS2Q9UI32 602 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 MXRA5Q9NR99 2828 aa14.62□□□□□ -0.07
VPS72-204ENST00000471423 IGHV3OR16-10A0A075B7F0 116 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 TRBV23-1A0A0A0MS06 115 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 TRAV40A0A0B4J280 105 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 K7N7A8 449 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 SIRPB1O00241 398 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 TOX4O94842 621 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 OR2H2O95918 312 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 EPHA1P21709 976 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 GABRR1P24046 479 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 PSMB9P28065 219 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 BMXP51813 675 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 ELP2Q6IA86 826 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 C17orf107Q6ZR85 190 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 FAM185AQ8N0U4 392 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 FCGR1BQ92637 280 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 MUL1Q969V5 352 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 SNX22Q96L94 193 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 NR1H4Q96RI1 486 aaPredicted RBP14.61□□□□□ -0.07
VPS72-204ENST00000471423 TBX15Q96SF7 602 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 S100A13Q99584 98 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 CHST6Q9GZX3 395 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 SIRPDQ9H106 197 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 METTL9Q9H1A3 318 aa14.61□□□□□ -0.07
VPS72-204ENST00000471423 NDUFB11Q9NX14 153 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms