RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 SFRP4Q6FHJ7 346 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-207ENST00000471342 BRICD5Q6PL45 260 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 MKXQ8IYA7 352 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 LRRC75A-AS1Q8N1F1 130 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 OSR2Q8N2R0 312 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 DTX3Q8N9I9 347 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 OR4M1Q8NGD0 313 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 C10orf105Q8TEF2 133 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 CCL17Q92583 94 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 DYRK2Q92630 601 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 FAM46BQ96A09 425 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 CMTM3Q96MX0 182 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 SULT4A1Q9BR01 284 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 TMEM246Q9BRR3 403 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 RAB1BQ9H0U4 201 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 METTL9Q9H1A3 318 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 MMP27Q9H306 513 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 FN3KRPQ9HA64 309 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 RHOFQ9HBH0 211 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.23□□□□□ -1.09
SF3A1-207ENST00000471342 RHBDL2Q9NX52 303 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 RASL12Q9NYN1 266 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 COMMD3Q9UBI1 195 aa8.23□□□□□ -1.09
SF3A1-207ENST00000471342 FBXO9Q9UK97 447 aaPredicted RBP8.23□□□□□ -1.09
SF3A1-207ENST00000471342 OTOGQ6ZRI0 2925 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CCDC160A6NGH7 325 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 OOEPA6NGQ2 149 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 RFPL4AA6NLU0 287 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 KIAA1324LA8MWY0 1029 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 RFPL4AL1F8VTS6 287 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CLPXO76031 633 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 HTR3BO95264 441 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 MPIG6BO95866 241 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 OR2H2O95918 312 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 KNG1P01042 644 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 WNT2P09544 360 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CGB3P0DN86 165 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CGB7P0DN87 165 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 TNFRSF1AP19438 455 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 SERPINA2P20848 420 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 IL2RGP31785 369 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 OR3A1P47881 315 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 SEC61A1P61619 476 aaKnown RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 PAX5Q02548 391 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 LSAMPQ13449 338 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 IL13RA2Q14627 380 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 UTF1Q5T230 341 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CROCCP3Q8IVE0 287 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 C11orf42Q8N5U0 333 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 OR4S1Q8NGB4 309 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 PLPPR1Q8TBJ4 325 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 ACOT12Q8WYK0 555 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 GCDHQ92947 438 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 NINJ1Q92982 152 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 MRPS24Q96EL2 167 aaKnown RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 COQ2Q96H96 371 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 POM121Q96HA1 1249 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 C1orf159Q96HA4 380 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 GAL3ST1Q99999 423 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 CHODLQ9H9P2 273 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 PLGRKTQ9HBL7 147 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 DLL4Q9NR61 685 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 DECR2Q9NUI1 292 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 BEX4Q9NWD9 120 aaPredicted RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 NLKQ9UBE8 527 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 KAAG1Q9UBP8 84 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 ANAPC10Q9UM13 185 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 ST3GAL6Q9Y274 331 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 POLDIP2Q9Y2S7 368 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 ETV7Q9Y603 341 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 NPTNQ9Y639 398 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 PRRC2AP48634 2157 aaKnown RBP8.22□□□□□ -1.09
SF3A1-207ENST00000471342 DYSFO75923 2080 aa8.22□□□□□ -1.09
SF3A1-207ENST00000471342 IGKV1D-8A0A087WSZ0 117 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 IGHV4-61A0A0C4DH41 118 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A10PA6NDY2 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A18PA6NE21 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A16PA6NEW6 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A20PA6NIJ5 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A8PA6NJQ4 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A7PA6NKC0 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 A6NLC8 198 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 OR2AT4A6NND4 320 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A22PA8MWA6 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A12PA8MX19 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A5PA8MXJ8 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A23PA8MXZ1 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 SIGLEC5O15389 551 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 MAGEB3O15480 346 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 SSX4O60224 188 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 APOA1P02647 267 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 GYPAP02724 150 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A15PP0C7V4 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A13PP0C7W8 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A14PP0C7W9 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 FAM90A24PP0C7X0 464 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 GTF2F2P13984 249 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 GLRA1P23415 457 aa8.21□□□□□ -1.1
SF3A1-207ENST00000471342 TNFSF4P23510 183 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms