RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 RNF170Q96K19 258 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SCGB3A2Q96PL1 93 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TXNDC17Q9BRA2 123 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TMEM175Q9BSA9 504 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TXNIPQ9H3M7 391 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 LRRC19Q9H756 370 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF160Q9HCG1 818 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ABCB9Q9NP78 766 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 LYARQ9NX58 379 aaKnown RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 PTTG3PQ9NZH4 202 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 COX16Q9P0S2 106 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 EXTL2Q9UBQ6 330 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SAR1BQ9Y6B6 198 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 SPTBN1Q01082 2364 aaKnown RBP0.29□□□□□ -2.36
UBXN4-207ENST00000471246 MROH7Q68CQ1 1323 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 DMDP11532 3685 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ADCY9O60503 1353 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 JCADQ9P266 1359 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 TECTAO75443 2155 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 FAM135BQ49AJ0 1406 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ABCC10Q5T3U5 1492 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 ACACAQ13085 2346 aa0.29□□□□□ -2.36
UBXN4-207ENST00000471246 CLASP1Q7Z460 1538 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 MICAL3Q7RTP6 2002 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 CFAP43Q8NDM7 1665 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 LAMA5O15230 3695 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 STRCQ7RTU9 1775 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 IGHV3-21A0A0B4J1V1 117 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 TRAV8-6A0A0B4J262 113 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 KBTBD11-OT1A0A1B0GTJ5 212 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 C19orf71A6NCJ1 209 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GMNCA6NCL1 334 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GOLGA8JA6NMD2 632 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 C9JQL5 133 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 LINC01619G3V211 115 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 LY6LH3BQJ8 138 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ISLRO14498 428 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 WBP4O75554 376 aaKnown RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 HLA-HP01893 362 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ANGP03950 147 aaKnown RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 SNRPAP09012 282 aaKnown RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 OR4Q2P0C623 313 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GOLGA8HP0CJ92 632 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GZMAP12544 262 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF22P17026 224 aaPredicted RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 UQCRFS1P47985 274 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 NUDT2P50583 147 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 PSG4Q00888 419 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 PRDX4Q13162 271 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GABRA6Q16445 453 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 LRRC66Q68CR7 880 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 PRNTQ86SH4 94 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 SCD5Q86SK9 330 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 AMN1Q8IY45 258 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ZFP82Q8N141 532 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 DEFB119Q8N690 84 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF555Q8NEP9 628 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 OR52E5Q8NH55 327 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ORAOV1Q8WV07 137 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 TNFRSF14Q92956 283 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 APH1AQ96BI3 265 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF625Q96I27 306 aaPredicted RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 TPD52L3Q96J77 140 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 UBE2E2Q96LR5 201 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 Q96MT0 163 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 TGS1Q96RS0 853 aaKnown RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 THTPAQ9BU02 230 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 STMN4Q9H169 189 aaPredicted RBP0.28□□□□□ -2.36
UBXN4-207ENST00000471246 GLS2Q9UI32 602 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 VAX2Q9UIW0 290 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 CCL26Q9Y258 94 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 OR51B2Q9Y5P1 312 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 U3KQK5 164 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 NCKAP5O14513 1909 aa0.28□□□□□ -2.36
UBXN4-207ENST00000471246 ATAD2BQ9ULI0 1458 aa0.28□□□□□ -2.37
UBXN4-207ENST00000471246 ADGRB3O60242 1522 aa0.28□□□□□ -2.37
UBXN4-207ENST00000471246 ZMYM4Q5VZL5 1548 aa0.28□□□□□ -2.37
UBXN4-207ENST00000471246 DLC1Q96QB1 1528 aa0.28□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF608Q9ULD9 1512 aaPredicted RBP0.28□□□□□ -2.37
UBXN4-207ENST00000471246 MUC4Q99102 2169 aa0.28□□□□□ -2.37
UBXN4-207ENST00000471246 ALMS1Q8TCU4 4167 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ALKQ9UM73 1620 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 SIGLEC1Q9BZZ2 1709 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 STRCP1A6NGW2 1772 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 MYCBP2O75592 4640 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ANK2Q01484 3957 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF638Q14966 1978 aaKnown RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CASP8AP2Q9UKL3 1982 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IGHV3-43A0A0B4J1X8 118 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IGKV1D-43A0A0B4J1Z2 117 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 IGKV2-29A2NJV5 120 aaPredicted RBP0.27□□□□□ -2.37
UBXN4-207ENST00000471246 GOLGA8OA6NCC3 632 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 A8MWP4 228 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 LEUTXA8MZ59 168 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 GOLGA8NF8WBI6 632 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 H3BMM0 161 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 K7EPK0 472 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 K7ERS5 55 aa0.27□□□□□ -2.37
UBXN4-207ENST00000471246 CPLX1O14810 134 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms