RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 UBL3O95164 117 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 AHSA1O95433 338 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C6orf47O95873 294 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 NPPAP01160 153 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 IFNA14P01570 189 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SERPINE1P05121 402 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 BPGMP07738 259 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 UBTFL6P0CB48 400 aaPredicted RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 OR8G3PP0DMU2 310 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RPS4Y1P22090 263 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 GCAP28676 217 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 GTF2E2P29084 291 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 IFNA8P32881 189 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 GLRXP35754 106 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ACVR1BP36896 505 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 MRPL19P49406 292 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FOXA1P55317 472 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 OR2B6P58173 313 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF85Q03923 595 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 CD300CQ08708 224 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FOXF1Q12946 379 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 STX3Q13277 289 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C1DQ13901 141 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 TRMT5Q32P41 509 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 LIN52Q52LA3 116 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 PHYHD1Q5SRE7 291 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FAM120AOSQ5T036 256 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 PDZK1Q5T2W1 519 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 LINC00242Q5T6M2 205 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 METTL11BQ5VVY1 283 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 METTL21CQ5VZV1 264 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FAM219BQ5XKK7 198 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 WDR25Q64LD2 544 aaPredicted RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SAXO2Q658L1 398 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 CLEC6AQ6EIG7 209 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C11orf71Q6IPW1 123 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ACSM5Q6NUN0 579 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FAM71F2Q6NXP2 309 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ARL9Q6T311 187 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C6orf89Q6UWU4 347 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF621Q6ZSS3 439 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 TPRA1Q86W33 373 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C10orf107Q8IVU9 208 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC38A6Q8IZM9 456 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 CLEC4FQ8N1N0 589 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 GPR137CQ8N3F9 429 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 MREGQ8N565 214 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 WDR31Q8NA23 367 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 OR4A15Q8NGL6 344 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 OR5M1Q8NGP8 315 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 AKR7LQ8NHP1 331 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 CDC26Q8NHZ8 85 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 NANPQ8TBE9 248 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 TCP10LQ8TDR4 215 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 C11orf40Q8WZ69 217 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RDH5Q92781 318 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC38A4Q969I6 547 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ITFG2Q969R8 447 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 CIDECQ96AQ7 238 aaPredicted RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RASD2Q96D21 266 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 TIMD4Q96H15 378 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 COQ2Q96H96 371 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ITCHQ96J02 903 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC35G5Q96KT7 338 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC38A2Q96QD8 506 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 KCNA7Q96RP8 456 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 DOK1Q99704 481 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC6A7Q99884 636 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 VGLL1Q99990 258 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RHOXF2Q9BQY4 288 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SIKE1Q9BRV8 207 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SLC35A5Q9BS91 424 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 SRXN1Q9BYN0 137 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 BCL2L14Q9BZR8 327 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 POLR2J2Q9GZM3 115 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 FAM192AQ9GZU8 254 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 POLR2J3Q9H1A7 115 aaKnown RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 OR51I1Q9H343 314 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 HEXA-AS1Q9H8Q6 139 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ANKRA2Q9H9E1 313 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM27Q9HBJ8 222 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 ADGRL4Q9HBW9 690 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 UFSP2Q9NUQ7 469 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 NUDT15Q9NV35 164 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 IMPAD1Q9NX62 359 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 EHFQ9NZC4 300 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RPS6KB2Q9UBS0 482 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 MARCOQ9UEW3 520 aaPredicted RBP2.03□□□□□ -2.08
UBXN4-206ENST00000470687 COPS3Q9UNS2 423 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 RNF24Q9Y225 148 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 PIGLQ9Y2B2 252 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 AP3M1Q9Y2T2 418 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 DCHS2Q6V1P9 2916 aa2.03□□□□□ -2.08
UBXN4-206ENST00000470687 JMJD1CQ15652 2540 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 FN1P02751 2386 aaKnown RBP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 PLCE1Q9P212 2302 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 ARFGEF3Q5TH69 2177 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 NIPBLQ6KC79 2804 aaeCLIP2.02□□□□□ -2.09
UBXN4-206ENST00000470687 TRAV36DV7A0A075B6V5 113 aa2.02□□□□□ -2.09
UBXN4-206ENST00000470687 IGHV3OR16-12A0A075B7B8 117 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms