RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 VCX3AQ9NNX9 186 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 IL36RNQ9UBH0 155 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 INSIG2Q9Y5U4 225 aa9.92□□□□□ -0.82
VPS13D-204ENST00000469054 TRIM64CA6NLI5 447 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 C22orf46C9J442 243 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 CDRT1O95170 752 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 ECDO95905 644 aaPredicted RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 CHRM2P08172 466 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 ADRA2CP18825 462 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 GALP22466 123 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 CALRP27797 417 aaKnown RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 CEBPDP49716 269 aaPredicted RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 FGF12P61328 243 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 PAX2Q02962 417 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF146Q15072 292 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 RSU1Q15404 277 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 SPIN3Q5JUX0 258 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 DCAF12L2Q5VW00 463 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 GLT8D1Q68CQ7 371 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 BTN2A1Q7KYR7 527 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 FGFRL1Q8N441 504 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 TMEM185AQ8NFB2 350 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 Q8NFD4 153 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 ST8SIA4Q92187 359 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 DACT3Q96B18 629 aaPredicted RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 FOXRED1Q96CU9 486 aaPredicted RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 S100A13Q99584 98 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 UQCC2Q9BRT2 126 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 METTL9Q9H1A3 318 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 SLC25A10Q9UBX3 287 aaPredicted RBP9.91□□□□□ -0.82
VPS13D-204ENST00000469054 GLS2Q9UI32 602 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 ING4Q9UNL4 249 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 GSTK1Q9Y2Q3 226 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
VPS13D-204ENST00000469054 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 IGHV2-70DA0A0C4DH43 119 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 KIR2DS1A0A191URI9 304 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 J3QLI3 93 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 ZNF780AO75290 641 aaPredicted RBP9.9□□□□□ -0.82
VPS13D-204ENST00000469054 HTR3BO95264 441 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 HAND1O96004 215 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 LIPFP07098 398 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 CD37P11049 281 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 DUSP1P28562 367 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 SNU13P55769 128 aaKnown RBP9.9□□□□□ -0.82
VPS13D-204ENST00000469054 CAV3P56539 151 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 COL10A1Q03692 680 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 GLIPR1L1Q6UWM5 242 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 OR4D6Q8NGJ1 314 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 OR10K1Q8NGX5 313 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 NUDT16L1Q9BRJ7 211 aaKnown RBP9.9□□□□□ -0.82
VPS13D-204ENST00000469054 TMPRSS13Q9BYE2 586 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 FAM234AQ9H0X4 552 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 C7orf69Q9H7B7 122 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 PCDHB16Q9NRJ7 776 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 IL36GQ9NZH8 169 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 STUB1Q9UNE7 303 aa9.9□□□□□ -0.82
VPS13D-204ENST00000469054 MRPS28Q9Y2Q9 187 aaKnown RBP9.9□□□□□ -0.82
VPS13D-204ENST00000469054 YLPM1P49750 1951 aaKnown RBP9.9□□□□□ -0.83
VPS13D-204ENST00000469054 K7N7A8 449 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 SH2D1BO14796 132 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 ENSAO43768 121 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 ZNF737O75373 536 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 CSTBP04080 98 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 TK1P04183 234 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 CD36P16671 472 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 JUNBP17275 347 aaPredicted RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 NDUFB7P17568 137 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 FGF9P31371 208 aaPredicted RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 CAPZA1P52907 286 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 PAX8Q06710 450 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 GPR176Q14439 515 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 SLC22A6Q4U2R8 563 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 FAM120AOSQ5T036 256 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 AWAT2Q6E213 333 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 ASCC1Q8N9N2 400 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 OR51T1Q8NGJ9 327 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 SNX22Q96L94 193 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 DCTN5Q9BTE1 182 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 SHARPINQ9H0F6 387 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 EXOSC4Q9NPD3 245 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 LPAR3Q9UBY5 353 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 RPUSD1Q9UJJ7 312 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 CDC42EP3Q9UKI2 254 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 SSR3Q9UNL2 185 aa9.89□□□□□ -0.83
VPS13D-204ENST00000469054 AK6Q9Y3D8 172 aaKnown RBP9.89□□□□□ -0.83
VPS13D-204ENST00000469054 TRAV1-2A0A0B4J238 106 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 TMEM82A0PJX8 343 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 DEGS1O15121 323 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 CRLF1O75462 422 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 OR2H2O95918 312 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 AVPP01185 164 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 SMIM18P0DKX4 95 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 GTF2F2P13984 249 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 ZNF44P15621 663 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 SERPINA2P20848 420 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 MYL9P24844 172 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 LMO1P25800 156 aa9.88□□□□□ -0.83
VPS13D-204ENST00000469054 PSMD7P51665 324 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms