RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 MRPL28Q13084 256 aaKnown RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 EDDM3AQ14507 147 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 LAIR2Q6ISS4 152 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 CRIP3Q6Q6R5 217 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 TMPRSS11AQ6ZMR5 421 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 C17orf107Q6ZR85 190 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 GDPD3Q7L5L3 318 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 OR5D14Q8NGL3 314 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 OR5D13Q8NGL4 314 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 SSMEM1Q8WWF3 244 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 RGP1Q92546 391 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 TMEM80Q96HE8 168 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 SNX22Q96L94 193 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 NKX3-1Q99801 234 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 JAM3Q9BX67 310 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 UNKLQ9H9P5 680 aaKnown RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 BABAM2Q9NXR7 383 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 NKX1-2Q9UD57 310 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 GSTK1Q9Y2Q3 226 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 CAB39Q9Y376 341 aaPredicted RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 SF3B6Q9Y3B4 125 aaKnown RBP9.43□□□□□ -0.9
CDHR3-205ENST00000468143 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
CDHR3-205ENST00000468143 A0A1W2PPH5 198 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 IRGMA1A4Y4 181 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 SIRPB1O00241 398 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 CASQ2O14958 399 aaPredicted RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 SULT1B1O43704 296 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 XPNPEP2O43895 674 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 PSPNO60542 156 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 PAHP00439 452 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 LALBAP00709 142 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 MT-ND2P03891 347 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 FBP1P09467 338 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 MYL12AP19105 171 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 RELBQ01201 579 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 IL18R1Q13478 541 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 CDK5R1Q15078 307 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 GRK1Q15835 563 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 TAF9Q16594 264 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 RPL22L1Q6P5R6 122 aaKnown RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 SATL1Q86VE3 508 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 LDLRAD3Q86YD5 345 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 Q8IYB0 196 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 C8orf59Q8N0T1 100 aaPredicted RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 OR8H2Q8N162 312 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 PARP16Q8N5Y8 322 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 ZFP41Q8N8Y5 198 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 OR4S1Q8NGB4 309 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 OR51A2Q8NGJ7 313 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 ORAI1Q96D31 301 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 ZNF747Q9BV97 191 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 HMG20AQ9NP66 347 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 CHCHD3Q9NX63 227 aaKnown RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 TAS2R4Q9NYW5 299 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 C1RLQ9NZP8 487 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 DIMT1Q9UNQ2 313 aaKnown RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 EXOSC1Q9Y3B2 195 aaKnown RBP9.42□□□□□ -0.9
CDHR3-205ENST00000468143 POMT1Q9Y6A1 747 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 STAB1Q9NY15 2570 aa9.42□□□□□ -0.9
CDHR3-205ENST00000468143 OGG1O15527 345 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 GPR137BO60478 399 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 KDM4BO94953 1096 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 RAB3AP20336 220 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 BMXP51813 675 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 DLX6P56179 175 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 ST3GAL4Q11206 333 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 KISS1Q15726 138 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 CCDC58Q4VC31 144 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 ASPHD2Q6ICH7 369 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 ZSCAN4Q8NAM6 433 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-205ENST00000468143 BPIFB6Q8NFQ5 453 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 OR13C5Q8NGS8 318 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 GPR148Q8TDV2 347 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 NR1H4Q96RI1 486 aaPredicted RBP9.41□□□□□ -0.9
CDHR3-205ENST00000468143 DPAGT1Q9H3H5 408 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 HEXA-AS1Q9H8Q6 139 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 ING3Q9NXR8 418 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 ZNRD1Q9P1U0 126 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 GLS2Q9UI32 602 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 HSPE1-MOB4S4R3N1 261 aa9.41□□□□□ -0.9
CDHR3-205ENST00000468143 PNMA8CA0A1B0GUJ8 204 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 hCG_1809904A0A1W2PP81 198 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 A0A1W2PPE2 198 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 A0A1W2PR64 198 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 A0A1W2PRV1 198 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 ERICH4A6NGS2 130 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 C17orf98A8MV24 154 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 SH2D1BO14796 132 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 MAGEB3O15480 346 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 OR2H2O95918 312 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 ZNF728P0DKX0 622 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 ZNF44P15621 663 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 RAG2P55895 527 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 ZP1P60852 638 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 SLC34A1Q06495 639 aa9.4□□□□□ -0.9
CDHR3-205ENST00000468143 SRSF4Q08170 494 aaKnown RBP9.4□□□□□ -0.9
CDHR3-205ENST00000468143 ACSM1Q08AH1 577 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms