RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 CALCBP10092 127 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 PRKACAP17612 351 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 SERPINA2P20848 420 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 RBM11P57052 281 aaKnown RBP12.68□□□□□ -0.38
NPHP4-205ENST00000466897 DYNC1I2Q13409 638 aaKnown RBP12.68□□□□□ -0.38
NPHP4-205ENST00000466897 MPV17LQ2QL34 196 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 HES5Q5TA89 166 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 ZNF788Q6ZQV5 615 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 LURAP1LQ8IV03 231 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 ZNF561Q8N587 486 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 CHST4Q8NCG5 386 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 C19orf18Q8NEA5 215 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 DEFB108BQ8NET1 73 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 CLDND2Q8NHS1 167 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 NDNFQ8TB73 568 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 KCTD12Q96CX2 325 aaKnown RBP12.68□□□□□ -0.38
NPHP4-205ENST00000466897 RAB39BQ96DA2 213 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 SEH1LQ96EE3 360 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 REG4Q9BYZ8 158 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 PATZ1Q9HBE1 687 aaKnown RBP12.68□□□□□ -0.38
NPHP4-205ENST00000466897 RSL24D1Q9UHA3 163 aaKnown RBP12.68□□□□□ -0.38
NPHP4-205ENST00000466897 DAPK2Q9UIK4 370 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 DSCAML1Q8TD84 2053 aa12.68□□□□□ -0.38
NPHP4-205ENST00000466897 AKAP9Q99996 3911 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 IGHV3OR15-7A0A075B7D8 119 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 RFPL4AA6NLU0 287 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 RFPL4AL1F8VTS6 287 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 H3BUI4 141 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 SIGLEC5O15389 551 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 GYPAP02724 150 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 MGMTP16455 207 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 AMY2BP19961 511 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 LMO1P25800 156 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 PRDX2P32119 198 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 NPY4RP50391 375 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 CAV3P56539 151 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 GMFBP60983 142 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 LMO4P61968 165 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 UNC119Q13432 240 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 P2RY14Q15391 338 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 FAM189A2Q15884 450 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 C11orf91Q3C1V1 193 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 C2orf76Q3KRA6 126 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 NLRC3Q7RTR2 1065 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 OR51D1Q8NGF3 324 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
NPHP4-205ENST00000466897 C1orf159Q96HA4 380 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 MED30Q96HR3 178 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 Q96M66 194 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 ZNF665Q9H7R5 613 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 ABRACLQ9P1F3 81 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 ITGB1BP2Q9UKP3 347 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 ETV7Q9Y603 341 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 ITPR3Q14573 2671 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
NPHP4-205ENST00000466897 A0A1W2PP11 408 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 DPPA5A6NC42 116 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 SH2D1BO14796 132 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 CRTAPO75718 401 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-205ENST00000466897 HAND1O96004 215 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 CHRM2P08172 466 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 WNT2P09544 360 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 SLC2A2P11168 524 aaPredicted RBP12.66□□□□□ -0.38
NPHP4-205ENST00000466897 RPS2P15880 293 aaKnown RBP12.66□□□□□ -0.38
NPHP4-205ENST00000466897 RAB6AP20340 208 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 RORCP51449 518 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 CLDN12P56749 244 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 IL13RA1P78552 427 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 SPCS2Q15005 226 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 BATF2Q8N1L9 274 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 CD177Q8N6Q3 437 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 OR8B3Q8NGG8 313 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 GAFA1Q96PS6 74 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 OR8B2Q96RD0 313 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 TMEM59Q9BXS4 323 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 FAM234AQ9H0X4 552 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 IL36RNQ9UBH0 155 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 PCDHB10Q9UN67 800 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 ST3GAL6Q9Y274 331 aa12.66□□□□□ -0.38
NPHP4-205ENST00000466897 ABCA2Q9BZC7 2435 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 CCDC160A6NGH7 325 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 A8MXK9 166 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 RNF223E7ERA6 249 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 GPR37O15354 613 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 TMPRSS2O15393 492 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 ADAM20O43506 726 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 RPS27AP62979 156 aaKnown RBP12.65□□□□□ -0.38
NPHP4-205ENST00000466897 PIGYQ3MUY2 71 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 IDNKQ5T6J7 187 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 Q6P435 159 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 ZNF841Q6ZN19 808 aa12.65□□□□□ -0.38
NPHP4-205ENST00000466897 FAM89BQ8N5H3 189 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms