RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 NUP37Q8NFH4 326 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 OR52B4Q8NGK2 314 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 GPR137Q96N19 417 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 UQCC2Q9BRT2 126 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 VAMP8Q9BV40 100 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 TRAPPC4Q9Y296 219 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 TMEM272A0A1B0GTI8 110 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 PATE3B3GLJ2 98 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 TRIM77I1YAP6 450 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 BMPR1BO00238 502 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 SLC17A2O00624 439 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 EPPINO95925 133 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 PGA3P0DJD8 388 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 DCTDP32321 178 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 SMAGPQ0VAQ4 97 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 ZNF273Q14593 569 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 CARFQ8N187 725 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 SH2D2AQ9NP31 389 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 TMED3Q9Y3Q3 217 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 OOEPA6NGQ2 149 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 OR5B21A6NL26 309 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 CRISP2P16562 243 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 CLDN20P56880 219 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 ISL1P61371 349 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 FMODQ06828 376 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 ZNF429Q86V71 674 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 ARRDC1Q8N5I2 433 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 PPP1R1CQ8WVI7 109 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 NTNG2Q96CW9 530 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 LINC00052Q96N35 136 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 TMPRSS13Q9BYE2 586 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 FOXO1Q12778 655 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 KCNMB1Q16558 191 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 C5orf17Q8NAS9 161 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 PARD6AQ9NPB6 346 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 NIT2Q9NQR4 276 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 NAT8BQ9UHF3 227 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 PARP14Q460N5 1801 aa7.73□□□□□ -1.17
HPS4-209ENST00000466781 C21orf140B9A014 251 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 RER1O15258 196 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 KIR2DL1P43626 348 aaPredicted RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 KIR2DL2P43627 348 aaPredicted RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 OR3A1P47881 315 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IZUMO4Q1ZYL8 232 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MAMSTRQ6ZN01 415 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ETV3LQ6ZN32 361 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ORAI1Q96D31 301 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 PIK3IP1Q96FE7 263 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ARHGAP5-AS1Q96IT6 56 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ZNF665Q9H7R5 613 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 SIRT3Q9NTG7 399 aaPredicted RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 RABAC1Q9UI14 185 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IGKV3-7A0A075B6H7 116 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 A0A0B4J2E0 115 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 A0A1B0GVG6 124 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 A0A1B0GX12 115 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 SIAH2O43255 324 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ICMTO60725 284 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 DRD3P35462 400 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 SKP2Q13309 424 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MMP25Q9NPA2 562 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 CES1P1Q9UKY3 287 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 KCNE3Q9Y6H6 103 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 EPXP11678 715 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 HIST1H1DP16402 221 aaKnown RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 BCL3P20749 454 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 GP2P55259 537 aaKnown RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 RNF212Q495C1 297 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MOGAT3Q86VF5 341 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ADIPOR1Q96A54 375 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 DERL3Q96Q80 235 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 FAAP24Q9BTP7 215 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ASCL3Q9NQ33 180 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MPC1Q9Y5U8 109 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IGHV3-13P01766 116 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IGHV3-7P01780 117 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IGHA1P01876 353 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 IGHA2P01877 340 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ARG1P05089 322 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 RNF224P0DH78 156 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MRPS11P82912 194 aaKnown RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 C3AR1Q16581 482 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 SLC25A35Q3KQZ1 300 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 WDR74Q6RFH5 385 aaPredicted RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 ZDHHC22Q8N966 263 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 DUSP18Q8NEJ0 188 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 NRTNQ99748 197 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ABHD14AQ9BUJ0 271 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 RNF7Q9UBF6 113 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 TDRD15B5MCY1 1934 aaKnown RBP7.72□□□□□ -1.17
HPS4-209ENST00000466781 UBE2L6O14933 153 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 PRF1P14222 555 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 MAGEA5P43359 124 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 NAAAQ02083 359 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 ECSCRQ19T08 205 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 PRICKLE4Q2TBC4 344 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 SP6Q3SY56 376 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 PWWP2BQ6NUJ5 590 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms