RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 SLC8B1Q6J4K2 584 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 WDR59Q6PJI9 974 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM205Q6UW68 189 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 CBLN2Q8IUK8 224 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MFSD6LQ8IWD5 586 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FBXO16Q8IX29 292 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 H1FOOQ8IZA3 346 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 LGI3Q8N145 548 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 LRRC75A-AS1Q8N1F1 130 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 GTPBP8Q8N3Z3 284 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 C2orf73Q8N5S3 287 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 METTL13Q8N6R0 699 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 SIDT2Q8NBJ9 832 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 LINC00301Q8NCQ3 95 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FBXO36Q8NEA4 188 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM185AQ8NFB2 350 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR10G3Q8NGC4 313 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR2AP1Q8NGE2 309 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR4P4Q8NGL7 312 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR13C4Q8NGS5 318 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR13C8Q8NGS7 320 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR10X1Q8NGY0 326 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FAM45AQ8TCE6 357 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MARCH1Q8TCQ1 289 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MRPS31Q92665 395 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TFGQ92734 400 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PTH2Q96A98 100 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PINX1Q96BK5 328 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ROPN1LQ96C74 230 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RCN3Q96D15 328 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 YIPF6Q96EC8 236 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MRPL53Q96EL3 112 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 REEP6Q96HR9 211 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 VSIG2Q96IQ7 327 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ITCHQ96J02 903 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TECTBQ96PL2 329 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RNF157Q96PX1 679 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 OR2M4Q96R27 311 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 SULT4A1Q9BR01 284 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 GINS4Q9BRT9 223 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TIMM29Q9BSF4 260 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TMEM43Q9BTV4 400 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RSG1Q9BU20 258 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 C1QTNF6Q9BXI9 259 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 BEX2Q9BXY8 128 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 RAB34Q9BZG1 259 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 C1orf198Q9H425 327 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FAM96AQ9H5X1 160 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 APMAPQ9HDC9 416 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MYOZ2Q9NPC6 264 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PXMP2Q9NR77 195 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 DUS2Q9NX74 493 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TAS2R13Q9NYV9 303 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 VPS29Q9UBQ0 182 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 ZNF230Q9UIE0 474 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 EMCNQ9ULC0 261 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 UBQLN1Q9UMX0 589 aaKnown RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TFR2Q9UP52 801 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PCYT1BQ9Y5K3 369 aaPredicted RBP2.68□□□□□ -1.98
VPS13D-203ENST00000466732 FLT4P35916 1363 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 C1orf167Q5SNV9 1468 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 TET3O43151 1660 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 PIK3C2BO00750 1634 aa2.68□□□□□ -1.98
VPS13D-203ENST00000466732 MYO18AQ92614 2054 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ANKRD31Q8N7Z5 1873 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 NRKQ7Z2Y5 1582 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 METP08581 1390 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TRAV30A0A087WSZ9 112 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 A0A087WUJ7 227 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 IGHV2-70DA0A0C4DH43 119 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 A0A1W2PP18 115 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 A0A1W2PPE3 182 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 TRAPPC13A5PLN9 417 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 LRIT2A6NDA9 550 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 EPOPA6NHQ4 379 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CLDN24A6NM45 220 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 C9JVG2 144 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 G3V3Y1 287 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 H0Y980 276 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RAB29O14966 203 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 OR2T1O43869 369 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ORC5O43913 435 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 MMP23AO75900 390 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 GPR75O95800 540 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 SLC25A27O95847 323 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CFDP00746 253 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 PMP2P02689 132 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 APODP05090 189 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CSF3P09919 207 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 UCHL1P09936 223 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 CD37P11049 281 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 PVRP15151 417 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ABOP16442 354 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 ELK1P19419 428 aa2.67□□□□□ -1.98
VPS13D-203ENST00000466732 AK4P27144 223 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 POLR2IP36954 125 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 STXBP1P61764 594 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RPS4XP62701 263 aaKnown RBP2.67□□□□□ -1.98
VPS13D-203ENST00000466732 RPS6P62753 249 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms